Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0244 ATGATGGTTGAAATAATTGATCTTAGAGATGCACTTCCATCACCACGTAGGGCATCTAATGCAACAAAAATTGATGTTTCTGTTAAAAAAGATCAATTTGAGAAAAATCCTATATCCTCAAGGGCTTGTGCAAAATCCAACTCACATCGCCGTAGCCAGCAACAAACTACTCCATGGCCATCCTCGAAATATACCTATGAGCCTTCTCATATTGCTTCTAGGTTTCAACTAGGCGTTCATGGTGAAAGGATTGCTACTGTACCTACACCTATACCTGAATCAAACACATACCTATTTCCACAGGGAGCTAGTCTCAATGAGCTTTGGACTCAAACAGAGCATGAGTTACTTCTAAGGGGAATCCTCAAGTATGGAAAAGGGCATTGGAGTGAAATTGCTAAACACTTTTTACCAAACAAAACAGAACAAGAAATTCAAAGTTATGCTACTAGCTTCTTCACAAACCTACCATACACACACCCTGAGGACTATTGTACAAGGAAACAAACTTTCTTTGCAAATAGCCTTATTCCTACAGACAAGATGAGTGCATCTCTCTCTAATGTCATGCCTATGATTGACAATAAGCCTCAACAAACCCTCATGCTTTTTCTAGAGGAAACTTCTTTCTTTTTGGTCCCGTCAAATGGAGAAGCTAGTAGCAACACTAAGACCAACATGTATGGGTCCCAAATGCAGATAGGTGATGAAAACACTTCTATGAATGCTAGTGTTAATGGAGAAGTTGATTTAGAGTTGCGCTTAGGTAGATGCAAGTGA 780 0.3949 MMVEIIDLRDALPSPRRASNATKIDVSVKKDQFEKNPISSRACAKSNSHRRSQQQTTPWPSSKYTYEPSHIASRFQLGVHGERIATVPTPIPESNTYLFPQGASLNELWTQTEHELLLRGILKYGKGHWSEIAKHFLPNKTEQEIQSYATSFFTNLPYTHPEDYCTRKQTFFANSLIPTDKMSASLSNVMPMIDNKPQQTLMLFLEETSFFLVPSNGEASSNTKTNMYGSQMQIGDENTSMNASVNGEVDLELRLGRCK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0244 259 MobiDBLite consensus disorder prediction 39 63 - -
Apr3g0244 259 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 25 256 - -
Apr3g0244 259 Gene3D - 107 157 - -
Apr3g0244 259 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 25 256 - -
Apr3g0244 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 157 IPR017930 -
Apr3g0244 259 ProSiteProfiles SANT domain profile. 104 157 IPR017884 -
Apr3g0244 259 ProSiteProfiles Myb-like domain profile. 109 153 IPR001005 -
Apr3g0244 259 SMART sant 105 155 IPR001005 -
Apr3g0244 259 Pfam Myb-like DNA-binding domain 109 148 IPR001005 -
Apr3g0244 259 CDD SANT 109 153 IPR001005 -
Apr3g0244 259 SUPERFAMILY Homeodomain-like 106 153 IPR009057 -
Apr3g0244 259 MobiDBLite consensus disorder prediction 35 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0244 Apr-Chr3 4466705 4467684 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr3g0244 Myb_DNA-binding 5.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0244 - - gmx:102663307 232.261