Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0207 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGATGAAGAGCGCGTGATGGAGTGGGAGTTGGGTCTCCCCACCGCCAACGATCTCACACCTCTATCTCAGCCGCTGATTCCGCCGGAGCTAGCCACCGCCTTCAGCATCTCGCCGGAGCCCCACCGCACACTTTTCGACGTCAACCGTGCCTCACGCAATACCCTCTCCACGCTCCGCGGCGGTGGAAGCGTGCACCAGGCGTTCTCCTCCAACAACAACAACGTCTACGACGAAGACGACGACGACGACACGGATCGGGACGGTTCTGGCTCCGATTCCAGGAAACAGCGGAAGATCGATTGCGTGGAGGAGGCGGATTCGGCGGTTCGCACGGAGAACTCGGCGGACAGGACGACGCTGAAGCGGCCGAGGTTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTTGACGTGGTGGCGCACCTAGGGATCAAGAACGCGGTTCCTAAAACGATTATGCAGTTGATGAACGTGGAGGGGTTGACTCGAGAGAATGTGGCTAGCCACCTACAGAAGTATCGGCTATACTTGAAGAGGATGCAGGGACTCTCGAACGAGGGTCCTTCTTCCTCCGATCAGTTATTCGCTTCGACTCCTGTGCCTCAGAGTTTGCATGACTCTGGTACTCCCAGTGCTCATTCCCATGGCAATGGCCATCTTCCTGTTCCCATTCCCATGCCTTATCCACCTCCTATGATGTCCATGCCTGTTCTTGGCATGCCTCATGCCCATGGCCCCATGGCCATCCCCATGCCTACTTCTTCCGCCACTTCCGGTTACCATCCTTATAACATGTTGCACCAAAGGGATTGGCCTCATCTTGCTCCTAATGATAAATAA 870 0.5678 MGEEVKTSEYDEERVMEWELGLPTANDLTPLSQPLIPPELATAFSISPEPHRTLFDVNRASRNTLSTLRGGGSVHQAFSSNNNNVYDEDDDDDTDRDGSGSDSRKQRKIDCVEEADSAVRTENSADRTTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSGTPSAHSHGNGHLPVPIPMPYPPPMMSMPVLGMPHAHGPMAIPMPTSSATSGYHPYNMLHQRDWPHLAPNDK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0207 289 MobiDBLite consensus disorder prediction 68 84 - -
Apr3g0207 289 MobiDBLite consensus disorder prediction 193 224 - -
Apr3g0207 289 Gene3D - 128 191 - -
Apr3g0207 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 188 IPR017930 -
Apr3g0207 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Apr3g0207 289 Pfam Myb-like DNA-binding domain 136 184 IPR001005 -
Apr3g0207 289 MobiDBLite consensus disorder prediction 68 108 - -
Apr3g0207 289 MobiDBLite consensus disorder prediction 193 232 - -
Apr3g0207 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 281 - -
Apr3g0207 289 SUPERFAMILY Homeodomain-like 129 189 IPR009057 -
Apr3g0207 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 281 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0207 Apr-Chr3 3788079 3790817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0207 1 254 G2-like Transcription Factor Family AT3G46640 59.574 6.62e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr3g0207 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0207 - - aprc:113858844 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0207 3 3788079 3790817 Apr3g0207 3 3788079 3790817 ECH