Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0204 ATGAGTTTTGTCTTCCGAGGGGGTAGGGGAGATATTGAAAGTGGATTTTCAGAATATGTTCCCGAAAGAACCTCCATGAGGGTTCATCCAGCTAGGCCAGTTAATAGCAATTCTCTAGCTTTTCTTATTACAGTTATTTTGATATTCATGATATTAAACTCCCCTCAGATGTTACATCATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAGCTTCAAGCACAGACCAGGATTCATGCTGCTGCAGCCTCTGGGTTGCTTGGCCATACTGAATTCCGTCTTCACATGCCGTCCTCGATTGCAATTGCAACTCGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGACACTTTGAGAGCTCTAGACTCTGATACTGCTTCGAGTACTCATTCAATGACGGACGAAGAGATAAATGCCTTGCCTATTCACACATATAAAGTTCCAGCTCCTACAAAAGATGGCTCAGCTGGTTTGGCATCCTCTTCAGGTGCAGCTGAGATTAAACAGGAATGTGGAGGAACAGAGGCAGGTATCATCAAAGGTCCAGAAGATGAGTTGACATGTACTATATGCTTAGACCAAGTCAAAAGAGGGGAGCTTATTCGTAGTTTGCCATGCTTGCATCAGTTTCATGCCAATTGCATTGATCCATGGCTCCGGCAACAAGGAACATGTCCTGTGTGCAAATTTAGAATAGGGTCGATAAGTGGTGGAAGCAGGGAGAGCGAGACCAACGGTTCAGATATTGTGTAG 828 0.4408 MSFVFRGGRGDIESGFSEYVPERTSMRVHPARPVNSNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQTRIHAAAASGLLGHTEFRLHMPSSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDSDTASSTHSMTDEEINALPIHTYKVPAPTKDGSAGLASSSGAAEIKQECGGTEAGIIKGPEDELTCTICLDQVKRGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRIGSISGGSRESETNGSDIV* 276
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0204 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 261 IPR013083 -
Apr3g0204 275 SMART ring_2 213 253 IPR001841 -
Apr3g0204 275 CDD RING-H2_PA-TM-RING 212 254 - -
Apr3g0204 275 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 275 - -
Apr3g0204 275 Pfam Ring finger domain 212 254 IPR001841 -
Apr3g0204 275 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Apr3g0204 275 SUPERFAMILY RING/U-box 208 260 - -
Apr3g0204 275 PANTHER TARGET OF ERK KINASE MPK-1 1 275 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr3g0204 Apr-Chr3 3742742 3746576 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0204 1 275 C3H Transcription Factor Family AT3G55530 67.148 8.63e-123 350
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0204 K16283 - gmx:100805406 468.388
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0204 3 3742742 3746576 Apr3g0204 3 3742742 3746576 ECH