Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0199 ATGCTTTCTGCGGATTCCCTTTTGGAAAATCTTCCTGGTTCTGTGAATGGATTCATATTTGAGAACGGTCCCATCTCGGTATTTTCGAATCAGAACCCAGAAAATGGGTTCAAGTTGGATGATTCAACATCCCCTTCTAACCATTCAGAATCTGGCACTGATTCTTCTCCTTCTACTGCCACAAGCTCAAATGGAGAACATTCAGAGAGTAGTAAACATTCTAATCCTATTCTCAGATACATAAGCGACATCCTCATGGATGAAGAAGATGACTTGGAGCGCAAACCCTGCATGTTGCAAGATTCTTTGAGACTCCAGGCTGCTGAAAAATCATTCTATGATGTGTTGGGGCATGATAATTTTGGTGTGACTACTAGTTCTGAGAGTTATAGCAGTTACACCACTGATAATTCAAATGAGTCTGATTGGTTTGAGTCTTCTTTCCTTCAAAAATCTTTAGTTCATTCCCCAGAAAACGCCTATGTAACTCCTGATCCGTTTAGAGAGACACAAGGTGGTATTTATTTTTCAAATGGGGTGTGGAATATGATTCACTCACAGGAAAAGCCACACATGATTCATGAGGGTGTGATGCGGGGTTCTATGACAGCAAGAGGATCAAGGGAGAAGAGAAGCCATCTCACGAATGATGATATCTCAGATCAAGTAGAGGAGAGAGGCAACAAGCTTTCAGCTGTATACGTTGATGACTCTGAGCTATCAAGCATGTTTGATGAGGTGCTGCTTTGTAAGGATGGTAGAAGTCCATCCATTTTCTGTGAACCATCCTCATCATCATCACAGATAGCTGATTCAGGAGGATCTAATGGAAAGACAACACGTTCGAAGAAAGGTTCCAACAAGGGGACAAGTGCAAGTGCAACAGTGGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGCTAGCTATGATCAAAGAACTGCAAGTGAAATACTCAAGCAGATTAGGCAACATTCTACGCCTTGTGGTGATGGACTTCAGCGTTTGGCGCATTACTTTGCCATTGGCCTTGAGACAAGATTAGCTGCTGATACACCCAAGTTCATTCTCTTTCAGTCAGCATCTGCTGCAGATATGTTAAAAGCATATAGAGTATATATCACAGCATCGCCATTTCAGAGGATGACAAATTTCTTGGCTAACCGAACTATTTTGAAGCTTGTACAAAATGAGAGCAGTCTTCACATTATTGACTTTGGAATTAGCTATGGTTTTCAATGGCCTTGCCTCATCCAACGTCTTTCAGAGAGAGCAGGAGGGCCTCCAAAGCTTCATATCACAGGAATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGGGTTGAGGAGACGGGGCGGCGATTGGAGAAGTATTGCAACAGGTTTGGAGTCCCATTTGAGTACAATTGCCTTGCACAAAAATGGGATACTATAAGACTTGAGGACCTTAAGATTGATAGGAATGAAGTAACTGTGGTTAACTGTTTGTTTAGGTTGGAGAACTTAACTGATGAAACAGTGACTGCAGATTGTCCAAGAGATGCTTTGTTAAGGTTGATCAGGAGGATCAACCCAAACATCTTCATACATGGGGTTGTGAATGGCACTTACAATGCACCGTTTTTCTTGACACGGTTCAGGGAAGCACTCTTCCACTTCTCATCATTGTTTGACATGTTTGAAGCTACCCTACCTCGCGAAGATCCATCGAGGCTTATGTTTGAGAAAGGTTTGTTTGGAAGGAATGCAATCAATGTGATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAGTGGTTTGTTAGGAACCAGAGAGCAGGGTTCAAGCAAATTCCATTGGCCACAGAACTCTTGAATAAAGTTAAGGACATGGTGAAAAAAGAATATCATAAAGATTTTGTAGTTGACGTGGATGGCAAATGGGTTTTGCAGGGATGGAAAGGGCGTATTCTTCTTGCTGTTTCTTCTTGGGTTCCTGCTTAA 2007 0.424 MLSADSLLENLPGSVNGFIFENGPISVFSNQNPENGFKLDDSTSPSNHSESGTDSSPSTATSSNGEHSESSKHSNPILRYISDILMDEEDDLERKPCMLQDSLRLQAAEKSFYDVLGHDNFGVTTSSESYSSYTTDNSNESDWFESSFLQKSLVHSPENAYVTPDPFRETQGGIYFSNGVWNMIHSQEKPHMIHEGVMRGSMTARGSREKRSHLTNDDISDQVEERGNKLSAVYVDDSELSSMFDEVLLCKDGRSPSIFCEPSSSSSQIADSGGSNGKTTRSKKGSNKGTSASATVDLWTLLTQCAQAVASYDQRTASEILKQIRQHSTPCGDGLQRLAHYFAIGLETRLAADTPKFILFQSASAADMLKAYRVYITASPFQRMTNFLANRTILKLVQNESSLHIIDFGISYGFQWPCLIQRLSERAGGPPKLHITGIDLPQPGFRPAERVEETGRRLEKYCNRFGVPFEYNCLAQKWDTIRLEDLKIDRNEVTVVNCLFRLENLTDETVTADCPRDALLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREALFHFSSLFDMFEATLPREDPSRLMFEKGLFGRNAINVIACEGAERVERPETYKQWFVRNQRAGFKQIPLATELLNKVKDMVKKEYHKDFVVDVDGKWVLQGWKGRILLAVSSWVPA* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0199 668 MobiDBLite consensus disorder prediction 31 73 - -
Apr3g0199 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 667 IPR005202 -
Apr3g0199 668 MobiDBLite consensus disorder prediction 260 291 - -
Apr3g0199 668 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 31 667 - -
Apr3g0199 668 Pfam GRAS domain family 300 665 IPR005202 -
Apr3g0199 668 ProSiteProfiles GRAS family profile. 289 666 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0199 Apr-Chr3 3690681 3693313 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0199 210 668 GRAS Transcription Factor Family AT1G07530 55.579 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr3g0199 GRAS 4.6e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0199 - - gmx:100815586 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0199 3 3690681 3693313 Apr3g0199 3 3690681 3693313 ECH