Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0180 ATGGCTGCGGTTGCAGATGCTGTTATTGGAAAATTGGTGGATGAACTGTTGAGTTCTGTTTTGGAAATGAAGGAAAGAGCTAAGAAATTCAGACCCACCTTGGAACTCTTGGAGAAAACCCTGAAAAGATTAGAAAAATTGGTTAAGCAAATAGATGAGTTTAACCGGCAACTGGATCGGCCGGCGGAGGAGACACAGAAGCTGGTGGACCAGATGAAGAATGGGAAGGAGCTTGTTCTGAAGTGCAATCAAGTCCAGTGGTGGAATTGTTGTTATCAGGCCAATTACCAAGAGGAGCTTGAAGCATTGGATGAGGATATTAAAAGGTTCTTTAGTTTAGATATGCAAGCTCAAATACAAAGGGATGGCTTGGAGACCTTGGTGGCGGTGAGAGAGCTTCGTGAGGAAATTAGAATTGTTGTTCCCAGAAGACTTGAATTAAGGGGCTTGTGTTCGCCTCCTGAACCCCCTCTTTTCACTGTTGGGTTGGATGATCCTTTGATGGATTTGAAGTTCAAGTTGCTGAGGGAGCAGGTTAGTGTCTCCGTTCTCACTGTTACCGGACCAGGAGGTTCGGGCAAATCTACGTTAGCCAAAATGTTTTGTTCCGATCAGAAAGTCAAAGGTAAATTTAAGGAAAATATCTTCTTCATCACATTTGGGAAAACGCCCAAGTGGATTACCATAGTGCAAAGGCTGTTCAAACACAACGGTTATGACGTGCCAGAGTTTCAAAGTGATGAAGATGCGATTAACCAATTGGAGCATTTGCTAAAAGAAATTGGTAAAAGCCCAATACTGCTGGTCCTAGATGATGTTTGGCCCGAATCAGTGTCTCTTGTAGACAATTTTGTGTTCCAAATCCCAAACTACATTATTTTGGTGACATCAAGATTCGCCATTGCTAGATTTGGCCCTCCATACACTTTGAAACCCCTTGATGATGTTCATGCTATAAATCTATTTCGCCACGAAGCATCCTTGAATCAAAGCAGCTCTGAAATCCCCGATTATGTTATCAATGAGATAGTGAAAGGGTGCAGTGGTTCTCCCTTGGCACTTAGAGTAAGTGGAAGAACCTTAAGTCATCAAAAACCGGCGGTGTGGCACAATAGGGCGAAGAAATTGGCGACGGGTCAATCAATTCTTGACACTAATAACGATGTGCTTACTTCTCTGCAAAAAAGCTTCGATGTCTTAGATCCTAAGGTCACTGAGTGTTTTAGGGACTTAAGCTTATTTCCTGAAGCCCAAAGGATCGCTGCTGCAGCCCTTGTTGATATGTGGTCACTACGTGATGAAGATGACGCTAGTTCAATGGATAAAATCAATGAACTAGCCAATCAGAACATGGCTGATATCCTTGTCACCAGGAATGTTGAAGGTGGCACAATTGAGTACAATAACCACTATGTCACACAACATGGTCTTCTTCGAGATCTAGCTATACTTCAAACAAGCCAGGAGCCAACAGAGAAGAGGAATAGACTAATTATTGACATAAGTGGAAACAATCTTCCATCATGGTGGACTAAACAGAATGAGCATCACATTGCAGCCCGCATATTATCCATATCAACTGATGAAGCGTTCGCTTCAGAATGGTGCAACTTGCAGCCAACTGAAGTTGAGGTTCTAGTGTTGAACATTCGACAAAAGAAGTTCACACTACCTATGTTCATGAAGAAAATGAATAAATTAGAAGTATTGATAATCACAAATTATGACTTCTATCGCGCTGACTTAGAGAATTTCGAACTACTTGATTGTCTATCTGATCTTAAACGAATCAGGTTAGAGAGGGTTTCAATTCCTTTCCTCAGCAAGACCGGAGTGCAATTAAAGAATCTCCAAAAGTTTTCATTTTTTATGTGCAATGTGAATGAAGCATTCAAAAATAGAAGTGTTCAAATTTCAGATGTGCTGCCAAATTTGGAGGAAATAAACATTGACTACTGTGATATGGTGGAATTGCCAGCGGGGCTCTCTAATATTGTTTCCTTAAAGAAGATTAGTATCACAAACTGCCATAAGCTTTCTGCACTTCCTAAAGGAATTGAAAATTTGGTCAATTTGGAATCACTAAGGCTTACTTCCTGTACTAGTTTAGTAGAGTTGCCAGACTCAACCACAAGCCTTCATAAACTGAAATTTCTTGACATCTCTGATTGCATAAGCCTTAGTAAGTTACCTGAGAACATGGGGAAGTTAAGTAATTTAGAAAGGGTCAATTGCAGAGGTTGCTCAAGATTAAGTGACTTGCCATACTCAATCACAGATCTTGGAGGCTTAAGAGATGTGATATGTGATGAAGAGAGGGCTGCACTATGGGCACCTTTCAAAGACATGCTTAGCGATCTAAGGCTAGAGGTGGTCCAAGTTGATTTCAACTTAAATTGGCTTCAATAA 2409 0.4097 MAAVADAVIGKLVDELLSSVLEMKERAKKFRPTLELLEKTLKRLEKLVKQIDEFNRQLDRPAEETQKLVDQMKNGKELVLKCNQVQWWNCCYQANYQEELEALDEDIKRFFSLDMQAQIQRDGLETLVAVRELREEIRIVVPRRLELRGLCSPPEPPLFTVGLDDPLMDLKFKLLREQVSVSVLTVTGPGGSGKSTLAKMFCSDQKVKGKFKENIFFITFGKTPKWITIVQRLFKHNGYDVPEFQSDEDAINQLEHLLKEIGKSPILLVLDDVWPESVSLVDNFVFQIPNYIILVTSRFAIARFGPPYTLKPLDDVHAINLFRHEASLNQSSSEIPDYVINEIVKGCSGSPLALRVSGRTLSHQKPAVWHNRAKKLATGQSILDTNNDVLTSLQKSFDVLDPKVTECFRDLSLFPEAQRIAAAALVDMWSLRDEDDASSMDKINELANQNMADILVTRNVEGGTIEYNNHYVTQHGLLRDLAILQTSQEPTEKRNRLIIDISGNNLPSWWTKQNEHHIAARILSISTDEAFASEWCNLQPTEVEVLVLNIRQKKFTLPMFMKKMNKLEVLIITNYDFYRADLENFELLDCLSDLKRIRLERVSIPFLSKTGVQLKNLQKFSFFMCNVNEAFKNRSVQISDVLPNLEEINIDYCDMVELPAGLSNIVSLKKISITNCHKLSALPKGIENLVNLESLRLTSCTSLVELPDSTTSLHKLKFLDISDCISLSKLPENMGKLSNLERVNCRGCSRLSDLPYSITDLGGLRDVICDEERAALWAPFKDMLSDLRLEVVQVDFNLNWLQ* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0180 802 Gene3D - 313 396 IPR042197 -
Apr3g0180 802 Coils Coil 34 57 - -
Apr3g0180 802 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Apr3g0180 802 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 138 IPR008808 -
Apr3g0180 802 SUPERFAMILY RNI-like 540 765 - -
Apr3g0180 802 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 801 IPR039203 GO:0050832
Apr3g0180 802 PRINTS Disease resistance protein signature 183 198 - -
Apr3g0180 802 PRINTS Disease resistance protein signature 260 274 - -
Apr3g0180 802 PRINTS Disease resistance protein signature 347 361 - -
Apr3g0180 802 PRINTS Disease resistance protein signature 711 727 - -
Apr3g0180 802 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 801 - -
Apr3g0180 802 Pfam NB-ARC domain 170 396 IPR002182 GO:0043531
Apr3g0180 802 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 411 IPR027417 -
Apr3g0180 802 Gene3D Ribonuclease Inhibitor 488 771 IPR032675 -
Apr3g0180 802 Gene3D - 148 303 IPR027417 -
Apr3g0180 802 Gene3D - 397 483 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0180 Apr-Chr3 3298258 3303648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0180 161 751 WRKY Transcription Factor Family AT5G45050 19.701 4.25e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0180 - - gmx:100812310 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0180 3 3298258 3303648 Apr3g0180 3 3298258 3303648 ECH
Apr7g0941 7 16472281 16477179 Apr3g0180 3 3298258 3303648 PCT