Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0179 ATGGGAGAGACCACGCAGTGTGTTGCCCTTGGAACACTATTTCAAGATAGACTGAAGATGATTTTGGAAATAGTGGAAAAGGGTCAAAAGAGCGAAAGCAACAAACAAATACTGAGGTCAACCCTCAAGGATATGACTCCTGTGGTGGAAGAGATCAAGCAATACAATGAACACTTGAATCCACCAAGAGAAGAAATCAACAACCTTATCAAAGAGAAAGATGCAAAGGAAGAGTTTGTGTGCAAAAGCTCTTCCATGAATTGTTGTTGGGAAAAATGTCTCTCTTGCCTTTTGTACGGATTTGCGCACAAGAGGGATGATTCCTTTGCTATTGATGACAAGCAAGCTCTTATGGCAAATGATATTAAAGAGACACTTTGCAAGGTGAGAGAAATTCTTGAGCTTCTTAGTAAAGAGAATTATCAGCAGAAACTTAGTGGTGTTGGAGCACCAATGAAGTGTCCTTTTGGTGTTCCTGAAAATCCAGAATTCACTGTTGGGTTGGATGTACCGTTAAGCAAGTTGAAGATGGAGGTTCTCAACGAAGGTGTATCCATCATTGTGTTGACTGGAGTGGGAGGAATGGGTAAAACAACTTTGGCTACAAAGCTGTGTTGGGATGAACAAGTCAAAGGTAAATTTGGGGAAAATATTTTATTTGTCACCTTCTCAAAAACGCCCAAGTTGAGGATTATTATTCAAAGACTATTTGAACACTGTGGATATCCTGTGCCTGATTTTCAAAGTGATGAAAATGCATTTAATCAATTGGGACTTTTGCTGAGGCAAATTGGTGGAAGTCCAATGTTGTTGGTCCTGGATGATGTTTGGCCTGGCTCAGAAACCCTTGTTGAGAAGTTTAAAGTCCAGATACCAGATTATAAAGTTTTGGTGACTTCTAGGGTTGCATTTCATAGATTGGGTACCCATTGTATCTTAAAACCACTTGTTCATGAAGATGCAATGACCCTTTTCCATCATTATGCTCTCTTGGAGGAAAGCAGTTCAAGTATACCTGATGAAGACCTTGTCCAAAAGGTTGTGAGAAACTGCAAGGGTTTACCACTTGCCATCAAAGTGATTGGGAGATCACTCAGTCATCATCCTTCTGAGTTGTGGCAAAAGATGGTGGAGGAATTGTCGCAAGGTCATTCTATACTTGATTCTGATATGGAATTACTTACTTGCCTCCAAAGGATCTTGGATCTTTTGGAAGATAATCCCATCAATATCATCAAGGAGTGCTTCATGGACCTTGCGTTGTTTCCTGAAGACCAAAGAATTCCCGTTACAGCTCTCATTGATATGTGGGCAGAGTTGTATAGACTAGATGATGATGGCATAGATGCAATGACCATCATCAACAAATTAAACTCCATGAATCTGGTTAATGTCTTGGTAGCAAGGAAAAATGCTAGTGACACAGACAATTACTACTACAATAACCACTTCATCATCCTTCACGATCTTTTGAGAGAGCTTGCAATTTATCAAAATAATCAGGAACCAATGGAGCAAAGAAAAAGGTTGATTATTGACATAAATGGAAACAAACGAGAGTGGTGGCTTGGGAAGAAGCAGAAAGGTGTGATGGCCGGCATATTTCCAAAATGGCTTGAATGGTGTGTTAAACTGAAGTCCCCACAGGCCCCTGCCCACATACTGTCTATCTCAACTGATGAAAATTGCACTCCATATTTATCTCATATGCAACCTGCTCAGACTAAGGTTCTTATTTTGAATCTTCAAACTAAGCAGTATTCCTTTCCTGAGTTCATGGAAGAAATGAGTAAACTTAAAGTTCTGATAATCACAAATTACAGTTTCCATCCTTCTGAAATGAACAATTTTGAGCTACTTGGCTCTATACGCAACCTAGAAAGAATCAGATTAGAGCGGATATCTGTTCCTTCCTTTGTCACTTTGAAGAATCTTAAAAAGATATCACTCTACTTGTGTAATCTGAGACAGGCTTTGGAAAATGTTAAGATGCTAATTTCAGAAGCTTTTCCAAATTTAGAAGAATTGAATATTGACTATTGCAAAGATATGGTAGAATTGCCTAAGGGGCTGTGTGATATCACCCCCCTGAAGAAGCTCAGCATTACTAATTGCCACAAGCTTTCTGTACTGCCCCAAGAAATTGGAAAGTTGGAGAATCTGGAACTCCTAAGGCTCAGCTCCTGTACTGGTTTGGAAGGAATACCAGATTCTATTGGAAGGCTTCCAAATCTACGACTTATTGATATCTCAAATTGCATAAACCTTCGTAATTTACCTGAGAACTTTGGCAATCTGTCTAATCTACAAAATCTCTACATGACAAGTTGTACAAAGTGTGAACTACCATTCTCAGTCGCTAGTCTTGAGAATTTGAAAGTCGTGATATGTGATGAAGAGACAGCTGCTTCATGGGAAGCTTTCAAACCTATGCTTCCCAATCTAAAGATAGATGTTCCGGGAGTTGATGTTAACTTGAACTGGCTTCATACGATTTCCTCCTAA 2505 0.394 MGETTQCVALGTLFQDRLKMILEIVEKGQKSESNKQILRSTLKDMTPVVEEIKQYNEHLNPPREEINNLIKEKDAKEEFVCKSSSMNCCWEKCLSCLLYGFAHKRDDSFAIDDKQALMANDIKETLCKVREILELLSKENYQQKLSGVGAPMKCPFGVPENPEFTVGLDVPLSKLKMEVLNEGVSIIVLTGVGGMGKTTLATKLCWDEQVKGKFGENILFVTFSKTPKLRIIIQRLFEHCGYPVPDFQSDENAFNQLGLLLRQIGGSPMLLVLDDVWPGSETLVEKFKVQIPDYKVLVTSRVAFHRLGTHCILKPLVHEDAMTLFHHYALLEESSSSIPDEDLVQKVVRNCKGLPLAIKVIGRSLSHHPSELWQKMVEELSQGHSILDSDMELLTCLQRILDLLEDNPINIIKECFMDLALFPEDQRIPVTALIDMWAELYRLDDDGIDAMTIINKLNSMNLVNVLVARKNASDTDNYYYNNHFIILHDLLRELAIYQNNQEPMEQRKRLIIDINGNKREWWLGKKQKGVMAGIFPKWLEWCVKLKSPQAPAHILSISTDENCTPYLSHMQPAQTKVLILNLQTKQYSFPEFMEEMSKLKVLIITNYSFHPSEMNNFELLGSIRNLERIRLERISVPSFVTLKNLKKISLYLCNLRQALENVKMLISEAFPNLEELNIDYCKDMVELPKGLCDITPLKKLSITNCHKLSVLPQEIGKLENLELLRLSSCTGLEGIPDSIGRLPNLRLIDISNCINLRNLPENFGNLSNLQNLYMTSCTKCELPFSVASLENLKVVICDEETAASWEAFKPMLPNLKIDVPGVDVNLNWLHTISS* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0179 834 Gene3D Ribonuclease Inhibitor 556 813 IPR032675 -
Apr3g0179 834 PRINTS Disease resistance protein signature 186 201 - -
Apr3g0179 834 PRINTS Disease resistance protein signature 263 277 - -
Apr3g0179 834 PRINTS Disease resistance protein signature 351 365 - -
Apr3g0179 834 PRINTS Disease resistance protein signature 740 756 - -
Apr3g0179 834 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 89 IPR008808 -
Apr3g0179 834 Gene3D - 149 307 IPR027417 -
Apr3g0179 834 SUPERFAMILY RNI-like 586 796 - -
Apr3g0179 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 419 IPR027417 -
Apr3g0179 834 Gene3D - 397 496 IPR036388 -
Apr3g0179 834 Pfam NB-ARC domain 181 383 IPR002182 GO:0043531
Apr3g0179 834 Gene3D - 316 392 IPR042197 -
Apr3g0179 834 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 820 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0179 Apr-Chr3 3273252 3278203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0179 583 792 WRKY Transcription Factor Family AT4G12020 25.472 3.82e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0179 - - gmx:100816134 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0179 3 3273252 3278203 Apr3g0179 3 3273252 3278203 ECH