Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0176 ATGGATCGGGCAGCGTTGACGGTTGGACCGGGTATGGACTTGCCAATCATGCACGATAGCGACCGTTACGATCTGGTTCGCGATATCGGTTCCGGGAATTTCGGTGTTGCGAGGTTGATGCAGGATAAGCAAACTAAGGAGCTCGTTGCCGTCAAGTATATCGAACGGGGTGATAAGATTGATGAAAATGTGAAGAGAGAAATCATTAATCACAGGTCTCTGAGACATCCTAACATTGTTAGGTTTAAGGAGGTCATTTTAACACCTACCCATCTGGCCATTGTGATGGAATATGCATCTGGAGGAGAACTCTTTGAGCGAATCTGCAATGCTGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCTATGCAAGTATGCCACCGGGACTTGAAGTTGGAAAACACTTTACTGGATGGCAGCCCAGCACCTCGGTTGAAAATATGTGACTTTGGGTACTCCAAGGTAAAGTTTTTAATCTCACTCTCTTCAGTGCTTCATTCGCAACCAAAGTCAACTGTTGGAACTCCTGCTTATATTGCTCCAGAAGTATTGCTGAAACAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCCAATGAACCTAAGGACTTCCGAAAGACAATTCAGAGAATTCTTAGTGTCCAGTATTCCATCCCAGACTTTGTTCAAATATCTCCTGAGTGTCGTCACCTTATCTCAAGGATCTTTGTTTTTGACCCAGCAGAGAGAATCACAATGTCTGAAATCTGGAACCATGAATGGTTTTTGAAGAATCTCCCTGCTGACCTAATGGATGAAAAGATAATGGGTAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCCTTGATACGATCATGCAGATAATTTCAGAGGCTACCATACCAGCAGCTGGGACCTATTCTTTAGATCAGTTCATGGTTGAAAACATTGATATGGATGATTACATTGATGAATTAGAATCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAG 1110 0.4315 MDRAALTVGPGMDLPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKVKFLISLSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYSIPDFVQISPECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMGNQFEEPDQPMQSLDTIMQIISEATIPAAGTYSLDQFMVENIDMDDYIDELESESELDIDSSGEIVYAI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0176 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Apr3g0176 369 Gene3D Transferase(Phosphotransferase) domain 1 99 293 - -
Apr3g0176 369 PANTHER SERINE/THREONINE KINASE 14 363 - -
Apr3g0176 369 SUPERFAMILY Protein kinase-like (PK-like) 16 322 IPR011009 -
Apr3g0176 369 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Apr3g0176 369 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 363 - -
Apr3g0176 369 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Apr3g0176 369 Pfam Protein kinase domain 23 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0176 369 SMART serkin_6 23 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0176 369 ProSiteProfiles Protein kinase domain profile. 23 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0176 Apr-Chr3 3181102 3187067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0176 22 290 CBL-interacting serine-threonine protein kinases AT5G25110 44.526 1.82e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Apr3g0176 Pkinase 5.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0176 K14498 - gmx:100806949 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0176 3 3181102 3187067 Apr3g0176 3 3181102 3187067 ECH