Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0174 ATGACAACGAGGAGTACACCCTGTGGAGCATGCAAGAGTTTGCGGCGAAAGTGCGTGGCAGAGTGCCTGTTCGCGCCGCACTTTCCGGTGGAAAACCGGCAACAGTTCGAGTGCATGCACCACGTGTTCGGATCGGGACACGTGGCAAGTATTCTGAAGCGTGTTCCGGAGGAGGCACGTGAGAACATAATCAAGACGCTCGTGTACCAGGCGGAGGCACGTGTGAGGGACCCCGTGCATGGTTGCATCGCTTTAATCACCGAGTTTGAAAACAAGCTCCATCAACTCCAAACGGATCTTGAAAAGGCGAAGAAGGAACTATCCTCCTACGTTAGCCCTCATGTTATGGAAGCGTTTTTGCTGAATCCTACAAGCATTCTCATGCCTCATTCGTATCCACCTGTTTTTACTTACAGTGGACACGAAATGGCACCTCCTTTTTTGATTCTTGACCCTCAGCGGCAAGACCAAGAGATGAAGTTCAATGCTGTGTATAAGGTGGTGGGTGTGGGTGGTTCTGTTGACACTTCTCAGATGCAGCAGCAACAAGGGGAACATCGTGTTCCTCATGCTACCCACAATGACAGTGGGGCACAACAACAACTACTGGATCAGTCAAACTCAAAACCATAG 633 0.5039 MTTRSTPCGACKSLRRKCVAECLFAPHFPVENRQQFECMHHVFGSGHVASILKRVPEEARENIIKTLVYQAEARVRDPVHGCIALITEFENKLHQLQTDLEKAKKELSSYVSPHVMEAFLLNPTSILMPHSYPPVFTYSGHEMAPPFLILDPQRQDQEMKFNAVYKVVGVGGSVDTSQMQQQQGEHRVPHATHNDSGAQQQLLDQSNSKP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0174 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 200 - -
Apr3g0174 210 Coils Coil 86 106 - -
Apr3g0174 210 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Apr3g0174 210 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Apr3g0174 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 4 200 - -
Apr3g0174 210 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0174 Apr-Chr3 3141312 3141944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0174 1 134 AS2 family AT5G66870 47.794 1.94e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr3g0174 LOB 7.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0174 - - aprc:113858216 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0174 3 3141312 3141944 Apr7g0937 7 16429274 16432657 PCT