Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0171 ATGCGGTGGTTACCTACACTTCCCTTCTCCGCCTCCAATTCCTCCTCGTCCTCCTCTTCCTCCGCCTCCTCCGCCGACCATCGCAGGAAGGCCTGGCTCTTTGGAAACTCCTCCAAGAAGTGCACGCGCCACGTCGCCGACCACGATGCCAGGTGGCACGACGAAGACGCCATCGTCGTGCCTCAGCCGTTGCCCTTGCCGGAGCTCTCTTCCGCCGCCGTACTCCGTCAGCGAGACGGTGACCGCCGTCTTCCCTCGCCCATGAAGGTTGCACCGTGCGCCACCGGCAATCGGATGCGGAGTGTTTTTGCTAGCCAAGAGACAAGAAGGAATATAGAGCAGGCTGAAACTAGGTCATCAAGGATGGTGCATCAAGATGGGAGTGGTTGTGAGAGCACTAGAGATAATAGCAATAATAACAATAACTTGATGAGTGTCCCTGGTAGGAGGAGTATTTCAAGCATTCCCTGTACAAGTCCCTCAATTAGTCCAAAGAAAACAAGGAATGGTGATTTTGTGCCATACTGTTATGCAAGTCCTAAAGGAAACCAATTCTGGTCTGCACCAGAGTTGCCTACTTTTGAAGCAGGGTTGCCACCTCCTGCCTTCTTTGATTTATCAGCATTAGGCACTGACGCTTCTCCTTCTTCCTCTTCCCATCAAAGTCCACAAGGAAGGAGTCCTCCGCAACACTTCAGAACCTTGAGTGGACCTCCATCACCCATACACACCATGTTTTCCCTTGAAATCTCAACGCCGCAACGCGAAAGTAATGCTCCTCCTCCTGTCAGTGTTCACCCGTTGCCTCTGCCGCCTGGGGCTGCCTTGCCTTCGCCATCTGCTGCCGCCACCTTTTCCCATGCCGTGGCTAAATCAGAATCATTGCCAATGAAAAACCAATGGAAAAAGGGGAAGCTTATTGGGCGTGGCACGTTTGGAAGTGTTTATGTAGCAACCAACAGAGAAACTGGCGCATTATGTGCAATGAAGGAAGTAGAATTATTTCCTGATGATCCAAAATCTGCAGAATCTATGAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCATCTAAAACATTCAAACATTGTGCAGTATTATGGTAGTGAAATAGTTGAGGGCCGGTTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTAGGCATATTCTTTCAGGGTTGGCTTATTTACATAGCAAAAAAACAATTCATAGGGACATCAAAGGTGCTAACTTGCTTGTGGATTCTGCTGGAGTAGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAACTGGACATGAAGCAAACCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGCTTTTTCAGGCTATGATGCAAAAGGATAACAGCTCTGATCTTGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACGATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAATATGAAGGAGCTGCAGCTATGTTTAAGGTGATGAAGGATACCCCTCCTATACCTGAAACATTGTCATCCGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACGGCTGCAGTGTTACTAGAACATCGGTTTTTGAAAAGTTCACCTCAGCCAGATGTTTTATCTTCCACCCAGCTGCATAACGGTACATGCTTCATGGATAAACCACTTAGTCCCAGAAAATATTCTGAAAATAAGTCTGATCAGTTGTCTGTACCCAGTACAAATATTGCGAAAGGGAAAGCGGCTGAGAGGCGAGGATTTTTCCTTCCTTCAATAGATATTCTCCCTGCACATTGGGACCAATGA 1899 0.4676 MRWLPTLPFSASNSSSSSSSSASSADHRRKAWLFGNSSKKCTRHVADHDARWHDEDAIVVPQPLPLPELSSAAVLRQRDGDRRLPSPMKVAPCATGNRMRSVFASQETRRNIEQAETRSSRMVHQDGSGCESTRDNSNNNNNLMSVPGRRSISSIPCTSPSISPKKTRNGDFVPYCYASPKGNQFWSAPELPTFEAGLPPPAFFDLSALGTDASPSSSSHQSPQGRSPPQHFRTLSGPPSPIHTMFSLEISTPQRESNAPPPVSVHPLPLPPGAALPSPSAAATFSHAVAKSESLPMKNQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVELFPDDPKSAESMKQLEQEIKVLSHLKHSNIVQYYGSEIVEGRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHEANLSLRGSPYWMAPELFQAMMQKDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSSEGKDFLRCCFKRNPAERPTAAVLLEHRFLKSSPQPDVLSSTQLHNGTCFMDKPLSPRKYSENKSDQLSVPSTNIAKGKAAERRGFFLPSIDILPAHWDQ* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0171 632 SUPERFAMILY Protein kinase-like (PK-like) 291 593 IPR011009 -
Apr3g0171 632 Gene3D Transferase(Phosphotransferase) domain 1 297 597 - -
Apr3g0171 632 MobiDBLite consensus disorder prediction 107 170 - -
Apr3g0171 632 MobiDBLite consensus disorder prediction 7 26 - -
Apr3g0171 632 ProSitePatterns Protein kinases ATP-binding region signature. 307 330 IPR017441 GO:0005524
Apr3g0171 632 MobiDBLite consensus disorder prediction 121 166 - -
Apr3g0171 632 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 609 - -
Apr3g0171 632 Pfam Protein kinase domain 302 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0171 632 MobiDBLite consensus disorder prediction 205 275 - -
Apr3g0171 632 MobiDBLite consensus disorder prediction 210 233 - -
Apr3g0171 632 ProSiteProfiles Protein kinase domain profile. 301 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0171 632 SMART serkin_6 301 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0171 632 MobiDBLite consensus disorder prediction 260 275 - -
Apr3g0171 632 MobiDBLite consensus disorder prediction 1 28 - -
Apr3g0171 632 MobiDBLite consensus disorder prediction 245 259 - -
Apr3g0171 632 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 609 - -
Apr3g0171 632 PRINTS Tyrosine kinase catalytic domain signature 380 393 IPR001245 GO:0004672|GO:0006468
Apr3g0171 632 PRINTS Tyrosine kinase catalytic domain signature 417 435 IPR001245 GO:0004672|GO:0006468
Apr3g0171 632 PRINTS Tyrosine kinase catalytic domain signature 489 511 IPR001245 GO:0004672|GO:0006468
Apr3g0171 632 PRINTS Tyrosine kinase catalytic domain signature 531 553 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0171 Apr-Chr3 3114345 3119653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0171 138 600 MAP Kinase Kinase Kinase AT5G66850 62.963 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr3g0171 Pkinase 9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0171 - - gmx:100796935 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0936 7 16410969 16416159 Apr3g0171 3 3114345 3119653 PCT