Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr3g0166 | ATGGGTCTGTGCAATTCGAAACCTCGTGCAAACCCCACTCTTTCTTCTTCTTCTTCTTCTCCCACTCACACACCCACTAATGCCAATGCCAATGCACAAAACTCAAAGCCCATCCCCAAAAAATCCCCTCTTTTCCCCTTTTACACTCCCAGCCCCGCCCACCACTTCTTCTCCGGCAAGTCTCCGGCGCCGACCACCCCTCGCCGCTTCTTCAGGCCGCCGTCACCGGCGAAGCACATTCGGGCCGTCCTTGCTCGCCGTCAGGGTTCCGTTAAACCAAACGAGGCCACAATCCCCGAAGGCTCCGCAGCAGAGGTTGTTGCTCTCGACAAGAACTTTGGATTCTCGAAACAGTTTAAGCACAAGTTTGAGCTCGGCGATGAGGTTGGAAGAGGACACTTTGGTTACACTTGTTCTGCCAAGTTTCTCAAGGCCCAATTCAAACCCCAACGAGTGGCTGTCAAGGTCATCCCCAAAGCCAAGATGACCACTGCCATTGCCATTGAGGATGTGAGAAGGGAAGTGAAGATTTTGAGGGCTTTGACTGGACATAAGAATCTAATTCAGTTTCATGATGCATATGAGGACAATGATAATGTCTACATAGTAATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGACAGAATATTGTCTAGAGGTGGGAAATACACGGAGGAAGATGCAAAGGCTGTCATGATACAAATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTCCATCGCGATCTTAAACCGGAGAACTTCTTGTTCACATCCAAAGACGAGAACTCAGATCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTCAAACTAGATGAAAGGCTCAATGATATTGTTGGTAGCGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCATACAGTACAGAGGCTGATGTCTGGAGTATTGGTGTGATTGCATATATTTTATTATGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCACCTTGGCCTTCTTTATCAGATGAGGCAAAGGATTTTGTTAAGCGACTTCTAAATAAAGATCCAAGGAAAAGAATGACCGCAGCACAGGCATTAGGTCATCCATGGATTAAAAATTATAAGGATGTAAAAGTACCCGTGGATATTCTAGTGTTCAAACTCATGAAGTCATATATGCGTTCCTCTTCTCTACGAAAAGCAGCTTTAAGGGCTTTGTCTAAGACATTAGCTATTGAAGAGCAGCAATATTTGAAGGAGCAGTTTGCGCTATTAGAGCCAAACAAAAATAACACCATTAGCTTGGAAAATATCAAAGCGGCCTTGATGAAGAATGCAACTGATGCTATGAAGGAGTCACGCATTCCTGATTTTCTGGCATCACTTAAAGCATTGCAATATAGAAGAATGGCTTTTGACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAACAGGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTCCCTGTTCATGCCGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTGAGCTTCCTTGGGTTTGTTAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAAACCTCACTAG | 1731 | 0.4541 | MGLCNSKPRANPTLSSSSSSPTHTPTNANANAQNSKPIPKKSPLFPFYTPSPAHHFFSGKSPAPTTPRRFFRPPSPAKHIRAVLARRQGSVKPNEATIPEGSAAEVVALDKNFGFSKQFKHKFELGDEVGRGHFGYTCSAKFLKAQFKPQRVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSDLKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYKDVKVPVDILVFKLMKSYMRSSSLRKAALRALSKTLAIEEQQYLKEQFALLEPNKNNTISLENIKAALMKNATDAMKESRIPDFLASLKALQYRRMAFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKPH* | 577 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr3g0166 | 576 | SMART | serkin_6 | 123 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr3g0166 | 576 | CDD | STKc_CAMK | 122 | 384 | - | - | |
Apr3g0166 | 576 | Pfam | Protein kinase domain | 124 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr3g0166 | 576 | SUPERFAMILY | EF-hand | 413 | 567 | IPR011992 | - | |
Apr3g0166 | 576 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 31 | 571 | - | - | |
Apr3g0166 | 576 | ProSiteProfiles | Protein kinase domain profile. | 123 | 385 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr3g0166 | 576 | Gene3D | Transferase(Phosphotransferase) domain 1 | 212 | 399 | - | - | |
Apr3g0166 | 576 | ProSitePatterns | Protein kinases ATP-binding region signature. | 129 | 155 | IPR017441 | GO:0005524 | |
Apr3g0166 | 576 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Apr3g0166 | 576 | Gene3D | - | 403 | 494 | - | - | |
Apr3g0166 | 576 | Gene3D | Phosphorylase Kinase; domain 1 | 116 | 211 | - | - | |
Apr3g0166 | 576 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 427 | 462 | IPR002048 | GO:0005509 | |
Apr3g0166 | 576 | PANTHER | CALMODULIN-DOMAIN KINASE CDPK PROTEIN | 31 | 571 | - | - | |
Apr3g0166 | 576 | SUPERFAMILY | Protein kinase-like (PK-like) | 121 | 415 | IPR011009 | - | |
Apr3g0166 | 576 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Apr3g0166 | 576 | MobiDBLite | consensus disorder prediction | 8 | 38 | - | - | |
Apr3g0166 | 576 | Gene3D | - | 410 | 564 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr3g0166 | Apr-Chr3 | 3040427 | 3044466 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr3g0166 | 1 | 576 | EF-hand Containing Proteins | AT3G50530 | 72.943 | 0.0 | 914 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Apr3g0166 | Pkinase | 8.1e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr3g0166 | K00924 | - | gmx:100803313 | 1028.47 |