Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0166 ATGGGTCTGTGCAATTCGAAACCTCGTGCAAACCCCACTCTTTCTTCTTCTTCTTCTTCTCCCACTCACACACCCACTAATGCCAATGCCAATGCACAAAACTCAAAGCCCATCCCCAAAAAATCCCCTCTTTTCCCCTTTTACACTCCCAGCCCCGCCCACCACTTCTTCTCCGGCAAGTCTCCGGCGCCGACCACCCCTCGCCGCTTCTTCAGGCCGCCGTCACCGGCGAAGCACATTCGGGCCGTCCTTGCTCGCCGTCAGGGTTCCGTTAAACCAAACGAGGCCACAATCCCCGAAGGCTCCGCAGCAGAGGTTGTTGCTCTCGACAAGAACTTTGGATTCTCGAAACAGTTTAAGCACAAGTTTGAGCTCGGCGATGAGGTTGGAAGAGGACACTTTGGTTACACTTGTTCTGCCAAGTTTCTCAAGGCCCAATTCAAACCCCAACGAGTGGCTGTCAAGGTCATCCCCAAAGCCAAGATGACCACTGCCATTGCCATTGAGGATGTGAGAAGGGAAGTGAAGATTTTGAGGGCTTTGACTGGACATAAGAATCTAATTCAGTTTCATGATGCATATGAGGACAATGATAATGTCTACATAGTAATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGACAGAATATTGTCTAGAGGTGGGAAATACACGGAGGAAGATGCAAAGGCTGTCATGATACAAATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTCCATCGCGATCTTAAACCGGAGAACTTCTTGTTCACATCCAAAGACGAGAACTCAGATCTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTCAAACTAGATGAAAGGCTCAATGATATTGTTGGTAGCGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCATACAGTACAGAGGCTGATGTCTGGAGTATTGGTGTGATTGCATATATTTTATTATGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTGCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCACCTTGGCCTTCTTTATCAGATGAGGCAAAGGATTTTGTTAAGCGACTTCTAAATAAAGATCCAAGGAAAAGAATGACCGCAGCACAGGCATTAGGTCATCCATGGATTAAAAATTATAAGGATGTAAAAGTACCCGTGGATATTCTAGTGTTCAAACTCATGAAGTCATATATGCGTTCCTCTTCTCTACGAAAAGCAGCTTTAAGGGCTTTGTCTAAGACATTAGCTATTGAAGAGCAGCAATATTTGAAGGAGCAGTTTGCGCTATTAGAGCCAAACAAAAATAACACCATTAGCTTGGAAAATATCAAAGCGGCCTTGATGAAGAATGCAACTGATGCTATGAAGGAGTCACGCATTCCTGATTTTCTGGCATCACTTAAAGCATTGCAATATAGAAGAATGGCTTTTGACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGAGCAACATGCACGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAACAGGGCTATAGTCATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTCCCTGTTCATGCCGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTGAGCTTCCTTGGGTTTGTTAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAAACCTCACTAG 1731 0.4541 MGLCNSKPRANPTLSSSSSSPTHTPTNANANAQNSKPIPKKSPLFPFYTPSPAHHFFSGKSPAPTTPRRFFRPPSPAKHIRAVLARRQGSVKPNEATIPEGSAAEVVALDKNFGFSKQFKHKFELGDEVGRGHFGYTCSAKFLKAQFKPQRVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSDLKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYKDVKVPVDILVFKLMKSYMRSSSLRKAALRALSKTLAIEEQQYLKEQFALLEPNKNNTISLENIKAALMKNATDAMKESRIPDFLASLKALQYRRMAFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKPH* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0166 576 SMART serkin_6 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0166 576 CDD STKc_CAMK 122 384 - -
Apr3g0166 576 Pfam Protein kinase domain 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0166 576 SUPERFAMILY EF-hand 413 567 IPR011992 -
Apr3g0166 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 571 - -
Apr3g0166 576 ProSiteProfiles Protein kinase domain profile. 123 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0166 576 Gene3D Transferase(Phosphotransferase) domain 1 212 399 - -
Apr3g0166 576 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Apr3g0166 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Apr3g0166 576 Gene3D - 403 494 - -
Apr3g0166 576 Gene3D Phosphorylase Kinase; domain 1 116 211 - -
Apr3g0166 576 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Apr3g0166 576 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 31 571 - -
Apr3g0166 576 SUPERFAMILY Protein kinase-like (PK-like) 121 415 IPR011009 -
Apr3g0166 576 MobiDBLite consensus disorder prediction 1 44 - -
Apr3g0166 576 MobiDBLite consensus disorder prediction 8 38 - -
Apr3g0166 576 Gene3D - 410 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0166 Apr-Chr3 3040427 3044466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0166 1 576 EF-hand Containing Proteins AT3G50530 72.943 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr3g0166 Pkinase 8.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0166 K00924 - gmx:100803313 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0166 3 3040427 3044466 Apr7g0934 7 16393610 16398666 PCT