Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0153 ATGGACATTGCACAAGTGGGAGCCAAAGCAAGAGCTCCACCTGCATTGGATATGGAAGCAACTACTTCAACAAAGAGAAGAAAAATCGCCATCACCAACAACGTTAACACTGATCAAGACCTCAAATTCTCACCATCCTCCATCGTTCCACTTAAGAATTTCAGCATAACTGCCTCGCCGGCGCCGGAGAAACGCTTCTCCAGCCACTCCGACGACGAATCTCCGGCGTCTTGTTGCTCCAGCAACGGATCCTTCGAACTCCATGAAAACAGGATCATCACATTCTCAGATCTAGAGGTTGACAGCGCGCAAGTTGAAACGTCGACGTGCAACTGCGGGGAGCAAATAAGGAGAGAGATGAGTCTCACGAGCGAGCTTCGAACGAATTCGCAAGAGGTGGAGTCAGTGGAGAAGAAGCTAACGACGAAGAACAAATCTCGCTGCGTTCTATCAACTCTGCAAAAAATGCCAACCGAATCGGAGCTCGAAGAATTCTTCGCCGCTGCCGAGAAGGACATTCAGAAACGCTTTTCAGAAAAGTATAATTATGATATTGTGAAGGACGTGCCATTGGAAGGACGTTACGAATGGGTTCAATTAAAGCCGTAA 609 0.4778 MDIAQVGAKARAPPALDMEATTSTKRRKIAITNNVNTDQDLKFSPSSIVPLKNFSITASPAPEKRFSSHSDDESPASCCSSNGSFELHENRIITFSDLEVDSAQVETSTCNCGEQIRREMSLTSELRTNSQEVESVEKKLTTKNKSRCVLSTLQKMPTESELEEFFAAAEKDIQKRFSEKYNYDIVKDVPLEGRYEWVQLKP* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0153 202 Pfam Cyclin-dependent kinase inhibitor 156 200 IPR003175 GO:0004861|GO:0005634|GO:0051726
Apr3g0153 202 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 7 202 IPR044275 GO:0004861|GO:0045736|GO:0051726
Apr3g0153 202 MobiDBLite consensus disorder prediction 61 80 - -
Apr3g0153 202 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 7 202 - -
Apr3g0153 202 PIRSF CKI_KRP_plant 3 202 IPR044275 GO:0004861|GO:0045736|GO:0051726
Apr3g0153 202 Gene3D p27 143 202 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0153 Apr-Chr3 2692684 2694574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0153 157 202 Core Cell Cycle Gene Families AT1G49620 71.739 9.64e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0153 - - ccaj:109818608 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0153 3 2692684 2694574 Apr7g0925 7 16270792 16272520 ECH
Apr3g0153 3 2692684 2694574 Apr3g0153 3 2692684 2694574 ECH
Apr7g0925 7 16270792 16272520 Apr3g0153 3 2692684 2694574 PCT