Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0151 ATGGTGGTGGTTGATGATCAAGCTGTGACTGTGGCATATTATGTGGAGGAGCTGCACGAGGATGTTCCTCTTTCTCACTTCGCTAGGATCTCTACTTTAAACACGGATAAGCAAAACAAGACAGTGGAGAATAAATACAATTCTGTTAAGGTTGCAACAGATGGAACATCCTCTCGTGGTGAGGCCTTGTCATCTGCTGTTATTCGAGCAGAGCAGGTCCAATCAAAATTGCAACCGGAATTCCCTAGTTTTGTGAAGTCCTTGGTCAGATCACATGTTGCTAGTTGTTTTTGGATGGGGCTGCCTGTGGCATTTTGTAAGAGACATTTGCCAGAAAAGGATACAACAATCATTTTGGAGGATGAATCTGGTAAAGAATACAAGACAAAATATATTGCATGTAAGACAGGATTGAGTGCTGGTTGGAGACAGTTTTCTGCTGTACACAAATTGCAGGAGGGTGATGTGTTGGTCTTCCAATTAGTTGAACCTACCAAATTTAAGGTTTATATAATAAGAGCTAACAATTTGAGGGAACTAGATGGGGCACTTTCCCTATTGAATCTAGATAGTTGCACAAAACAAAAAGTGGGAGGCAAAGATAATGCGGATACTGATGCTGTAACATGCAAAAGCCCGAAGAGAAAACATGGTAAAACCGTGCCACTAAATGTACAAAAGAAAAAGAAGACCAACGTGTCAAGATTGGGACCTAAGGCTAGGCTGTCTGAAGAAGTAGAAGAATCTGAAAACGGCAGTGATGACGCTCTCTCAGAAGTACTGGAGGGATTTAAAATGCTTGAATTCAAAGATGTTAAAGGTTTTGAAAATTTCAGCATCATAGTTGATGGAATGCCAATAGATGGTGAATTCTCTACTGAAGTTCGAAACAAGTACTATAGACTCTGCTGCAGCCAGCAAGCTTTTCTTCATGAGAATCTCATCAAGGGCATGAACTATAAGCTCATTGCTGGAATCATATCTGAAACTGTTAACATTGCTGATGCCATAAAAGTTAGTGTCATTTGCACCCCACGTTTCGAATTTGCTAACTGGGATAAAACATTGCTTGCCTTTGAGCATTTGGGAATGAATGTTCAATTTTTAAGAGTTCGGTTGCGCCGCCTTGTGAGCATTGCTTATGAAACAGATGATGCCTCAGAGACCAGAAGATTCTTGGCTTATAGAAATGAACACAGTCAAGCAGATGATGAAATAAAGAACATGGAAACCAAGCTCCAAGAGTTGAAGGGTGCTTGTGATGATTTTGGTGCTTATTTGGAGAGTTTGAAGTGCAAAGCTGAAAGCTATCAGCTCGAGTTTCAGAAGGAGGTTGCTGCTCCATGGTGA 1350 0.4089 MVVVDDQAVTVAYYVEELHEDVPLSHFARISTLNTDKQNKTVENKYNSVKVATDGTSSRGEALSSAVIRAEQVQSKLQPEFPSFVKSLVRSHVASCFWMGLPVAFCKRHLPEKDTTIILEDESGKEYKTKYIACKTGLSAGWRQFSAVHKLQEGDVLVFQLVEPTKFKVYIIRANNLRELDGALSLLNLDSCTKQKVGGKDNADTDAVTCKSPKRKHGKTVPLNVQKKKKTNVSRLGPKARLSEEVEESENGSDDALSEVLEGFKMLEFKDVKGFENFSIIVDGMPIDGEFSTEVRNKYYRLCCSQQAFLHENLIKGMNYKLIAGIISETVNIADAIKVSVICTPRFEFANWDKTLLAFEHLGMNVQFLRVRLRRLVSIAYETDDASETRRFLAYRNEHSQADDEIKNMETKLQELKGACDDFGAYLESLKCKAESYQLEFQKEVAAPW* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0151 449 Pfam B3 DNA binding domain 84 174 IPR003340 GO:0003677
Apr3g0151 449 Gene3D - 65 177 IPR015300 -
Apr3g0151 449 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 50 386 - -
Apr3g0151 449 MobiDBLite consensus disorder prediction 199 253 - -
Apr3g0151 449 Coils Coil 392 419 - -
Apr3g0151 449 Coils Coil 239 259 - -
Apr3g0151 449 SUPERFAMILY DNA-binding pseudobarrel domain 77 175 IPR015300 -
Apr3g0151 449 ProSiteProfiles B3 DNA-binding domain profile. 84 175 IPR003340 GO:0003677
Apr3g0151 449 SMART B3_2 84 175 IPR003340 GO:0003677
Apr3g0151 449 MobiDBLite consensus disorder prediction 199 213 - -
Apr3g0151 449 CDD B3_DNA 82 173 IPR003340 GO:0003677
Apr3g0151 449 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 50 386 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0151 Apr-Chr3 2673553 2677832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0151 66 236 B3 DNA Binding Superfamily AT3G19184 39.655 1.17e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Apr3g0151 B3 1.5e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0151 - - gmx:100819237 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0151 3 2673553 2677832 Apr3g0151 3 2673553 2677832 ECH