Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0138 ATGAGGTGCTGCTATGTCAAACTGGAAGAAGTCAAACTCCCCTTTGTGCTCCCGACCCATCACAAGCTGTTGATTCAGGAGGGAGGATGCAATGGAAAATCAATACGTTCACGTTTAAAGAAAGACTCCACCAACACAGGTGGAACAGCTGTAGATTTATGGACACTTCTAACTCAATGTGCACAGGCTGTGGCAGGCTATAACCAAAGGAATGCAAATGACTTACTCAAGCAGATTAGGCAACACTCTTCACGTTTTGGAGATGGACTTCATCGTTTAGCTCATTACTTTGCCATTGGCCTTGAGACAAGATTGGCTGCTGGGACACAATTATATATGCCTTTTGAAGTGGCAACTGCTGCTGATATGCTGAAAGCTTACAAACTATTTGTTACACCCTCTCCTTTGCAGAGGATGTCAAATTTATTTACAACCAAGACAATCATTAGTCTTGTGAGGAATGAGAGCAGTGTTCATCTTGTTGACTTTGGCATTTGCTATGGTTTCCAGTTGCCCTGCCTTATCAGGAAACTGTTAGAAAGACAAGGTGGTCCTCCAAGGCTTCAAATAATCGGAATTGATCTTCCGCAGTCAGGATTTCGGCCTGCGGAAAGGGTTGAGCCGTTGAGGAAACCAGGTGGCATTTGGAGAACTACTGCAAGAAGTTCAAGTTTATCAGGAAGATTAATCCAAACATCTTCATCCGTGGTATATTCAATGGCATTCTACCACTTCTCATCACTGTTTGATATGTTTGATGCTAATGTGCAACGAGAAGAACCACAAAGGGAGATGCTTGAGAAAGGGTTGTTTGGACGGAATGCCATCAATGTTCTAGCGTGTGAAGCAGAGAGGGTGGAAAGGCCCTATAAGCAGTGGAGGGTTAGGAACCTGAGAGCTAGGGTCAAGCAAGTCAGGTTGGATCCTGAATTGATGAAGAGGGAATATCATAAAAATTTTGTAGTGGCTGAGGATGGCAAGTGGGATTTTCAGGGGTGGAAAGGGCTTATTCTCAATGTTTTTTATGCTTGGGTTCCTGCTTAA 1044 0.4368 MRCCYVKLEEVKLPFVLPTHHKLLIQEGGCNGKSIRSRLKKDSTNTGGTAVDLWTLLTQCAQAVAGYNQRNANDLLKQIRQHSSRFGDGLHRLAHYFAIGLETRLAAGTQLYMPFEVATAADMLKAYKLFVTPSPLQRMSNLFTTKTIISLVRNESSVHLVDFGICYGFQLPCLIRKLLERQGGPPRLQIIGIDLPQSGFRPAERVEPLRKPGGIWRTTARSSSLSGRLIQTSSSVVYSMAFYHFSSLFDMFDANVQREEPQREMLEKGLFGRNAINVLACEAERVERPYKQWRVRNLRARVKQVRLDPELMKREYHKNFVVAEDGKWDFQGWKGLILNVFYAWVPA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0138 347 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 33 207 - -
Apr3g0138 347 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 240 346 - -
Apr3g0138 347 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 33 207 IPR005202 -
Apr3g0138 347 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 240 346 IPR005202 -
Apr3g0138 347 ProSiteProfiles GRAS family profile. 44 347 IPR005202 -
Apr3g0138 347 Pfam GRAS domain family 241 344 IPR005202 -
Apr3g0138 347 Pfam GRAS domain family 55 205 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0138 Apr-Chr3 2443926 2445136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0138 241 347 GRAS Transcription Factor Family AT5G59450 44.538 2.02e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr3g0138 GRAS 2.7e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0138 - - aprc:113858184 705.671