Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0121 ATGGAAGGAGAAGGAGGAAGCACAAGGAAGAGAGGAAAAGAGGGTGAAGAAACAAGGTACAAAGGAATAAGGATGAGAAAGTGGGGCAAGTGGGTCGCTGAGATTCGAGAACCCAACAAGCGTTCTCGTATATGGCTCGGTTCTTATTCCACTCCTGTTGCCGCTGCGCGTGCTTACGACACCGCCGTTTTCTATCTCCGGGGACCCTCCGCTCGCCTTAACTTCCCCGAACTTCTCGCCGGAGAAGCCGCTGCTTCCGACATGTCTGCTGCTTCCATCAGGAAGAAAGCCACCGAGGTCGGTGCCAGAGTCGACGCCCTCCACCGCCAGCACCACCACGATGCCGCCGTAGATTTTGCCGAACGGGTCGACCTTAATAAGCTACCTGAACCTGCTAATTCGGATTAA 408 0.5466 MEGEGGSTRKRGKEGEETRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAGEAAASDMSAASIRKKATEVGARVDALHRQHHHDAAVDFAERVDLNKLPEPANSD* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0121 135 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 1 135 - -
Apr3g0121 135 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 1 135 - -
Apr3g0121 135 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 PRINTS Ethylene responsive element binding protein signature 58 78 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Apr3g0121 135 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Apr3g0121 135 Gene3D AP2/ERF domain 18 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0121 Apr-Chr3 2072750 2073157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0121 13 135 AP2-EREBP Transcription Factor Family AT3G50260 66.667 1.15e-54 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr3g0121 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0121 K09286 - gmx:100784157 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0121 3 2072750 2073157 Apr3g0121 3 2072750 2073157 ECH
Apr7g0892 7 15943880 15944999 Apr3g0121 3 2072750 2073157 PCT