Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0117 ATGCATAATTCCAAAACATTCACAACACTCTTTCCTCTCTTCCTTTACTTCGCACTCGCCTCCTCCGCGAACATGCTACCCCCAGACGCCGTCGCCCTCTTGTCGTTCAAGCGCCAAGCAGACCAAGACGACAAGCTACTCTACGCGCTGAACGAGCGCTACGACTACTGCGAGTGGAGGGGAGTGAAGTGCGCACAAGGCAGGGTGGTACGCTTCGTCGTTCAAGGTTTGGGCCTCCGCGGCGCATTCCCTCCGAACACCCTCACTGGACTGGAGCAGCTCCGAGTATTGAGCCTCCGCAACAATTCGCTCTTCGGGCCCATCCCAGATCTCTCTCCACTCACTAACCTGAAGTCACTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCTTCAATCCTTTCCCTCCATCGCCTCCTCACTCTTTCACTTTCCCATAATACCCTCACCGGTTCGCTTCCGGTTCAACTAACCCTCCTCGACCGCCTCATTTCTCTCCGGCTTAACTCTAACAATTTCACCGGAACCGTTCCCGCTCTCAACCAAACCGCTCTCAGACTATTTGATGTTTCTTTTAACAACCTCACCGGTCCGGTTCCAGTGACCCCAACCCTCGTTCTTTTCAACGCGACGTCGTTTTCGGGGAACCCTGGTCTCTGCGGGGAAATCATACACAAACAATGCGACCCTCGTTCTCACTTCTTCGGTACCGGCGCGTCCTCTTCGGCGCCGTTGAGTCAGAGCGAGGAATCTCAGGGCATCGTCGTGGTTCCTTCCCCGACCAGAACTAAACGTGGCCATAAAAAAACCGGCTTGGTTTTCGGCTTCGTTTTTGTTGGGGTTGCGATTCTCGCTGCTTTTGCACTCGCCGTGATGGCGTTGGCTAGGAAAAGACAAACCGGTTCGAGAAAACCGGAACCGCTGGAAATGGAAAGTGTTCCTGCGGCGGAGGAAATTGAAATGGGGGAGAGGGAGGTGAAGGTGAAGAAGATGGAAGAAGCACATAGGAGTGGGAAGTTGGTGTTCTGCTGCGGGGAGGTGCAGCATTACACGCTGGAACAGCTTATGAGAGCTTCGGCGGAGTTGTTGGGGAGGGGGAGCGTGGGAACCACGTACAAGGCGGTGATGGATTCGCAGTTGATAGTGACGGTGAAGAGGTTGGATGCTGGGAAAACGGCGGTGACTAATGGGGAAGTGTTTGAGCGTCACATGGAGGTTGTGGGGAGGCTTCGCCACCCCAATTTGGTACCTTTAAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTTATCTATGATTATCAACCTAACGGCAGCCTCTTCAACCTCGTCCATGGTTCAAGATCAGCAAGGGCCAAGCCCCTGCATTGGACATCATGCTTAAAAATAGCAGAAGATGTGGCTCATGGACTTGCTTACATACACCAAGCTTCATCTTTAATTCACGGGAACTTGAAATCCTCTAATGTCCTTCTTGGAGCCGATTTTGAAGCTTGTGTCACAGATTATTGTTTGGCCTTTCTTGCAGACTCTTCACTCGCTGAAGATCCTGATTCTGCCACCTATAAAGCACCAGAGGCTCGCAAAAGTAGCCGCAGGGCCACTTCGAAGTCTGATGTGTATGCTTTTGGTGTGCTTCTTTTGGAGCTTTTGACGGGTAAACATCCTTCTCAACATCCTTTTCTTGCACCAACAGATCTGCAAGATTGGGTCAGAGCAATGAGGGATGATGATGGCAGTGAAGATAACCGGCTAGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCAACCTCACCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGGGTTACCATGGAAGACAATACACATGTGGGACTCTCATAG 1902 0.5174 MHNSKTFTTLFPLFLYFALASSANMLPPDAVALLSFKRQADQDDKLLYALNERYDYCEWRGVKCAQGRVVRFVVQGLGLRGAFPPNTLTGLEQLRVLSLRNNSLFGPIPDLSPLTNLKSLFLDHNNFSGSFPPSILSLHRLLTLSLSHNTLTGSLPVQLTLLDRLISLRLNSNNFTGTVPALNQTALRLFDVSFNNLTGPVPVTPTLVLFNATSFSGNPGLCGEIIHKQCDPRSHFFGTGASSSAPLSQSEESQGIVVVPSPTRTKRGHKKTGLVFGFVFVGVAILAAFALAVMALARKRQTGSRKPEPLEMESVPAAEEIEMGEREVKVKKMEEAHRSGKLVFCCGEVQHYTLEQLMRASAELLGRGSVGTTYKAVMDSQLIVTVKRLDAGKTAVTNGEVFERHMEVVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQASSLIHGNLKSSNVLLGADFEACVTDYCLAFLADSSLAEDPDSATYKAPEARKSSRRATSKSDVYAFGVLLLELLTGKHPSQHPFLAPTDLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDRVTMEDNTHVGLS* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0117 633 PANTHER LRR RECEPTOR-LIKE KINASE 7 629 - -
Apr3g0117 633 ProSiteProfiles Protein kinase domain profile. 359 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0117 633 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Apr3g0117 633 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 629 - -
Apr3g0117 633 Pfam Protein kinase domain 362 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0117 633 Gene3D Transferase(Phosphotransferase) domain 1 438 630 - -
Apr3g0117 633 SUPERFAMILY L domain-like 27 223 - -
Apr3g0117 633 Gene3D Phosphorylase Kinase; domain 1 324 436 - -
Apr3g0117 633 SUPERFAMILY Protein kinase-like (PK-like) 363 620 IPR011009 -
Apr3g0117 633 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Apr3g0117 633 Gene3D Ribonuclease Inhibitor 184 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0117 Apr-Chr3 2009026 2011872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0117 24 627 Receptor kinase-like Gene Family AT3G50230 55.416 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr3g0117 Pkinase 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0117 - - gmx:100783086 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0117 3 2009026 2011872 Apr3g0117 3 2009026 2011872 ECH