Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0107 ATGAGCCACCACAGCGTTGGTCTCCTCTTTCAACCTCTGATTATTGCGTTCGCTCTTCTCCTCACTGTTAACAAATGCAATGGCTTAAGCAGAGACGGTGTTCTGTTGCTTTCTTTCAAGTACGCAGTGCTGAACGACCCTCTTTACACGCTTGCAAATTGGAACTACAGCGACGAAACTCCGTGTTCCTGGAGGGGAGTTTCATGTTCAACCGTTGCAGGTGAAACCAATGGTACCCAAAATCGCGTGACTTCGTTGTCGCTACCGAATTCTCAGCTTCTGGGTTCGATTCCTTCCGATCTGGGTTCCATTGAGCACCTTGAAATTCTCGACCTTTCTAACAACTCTCTCAATGGGTCTCTTCCTTCTTCGCTTTCCCAAGCGTCCCAGCTTCGGTTCCTGAACCTGTCTAACAACTTGATTACAGGGGAGGTTCCGGAATCCTTAACGCAGCTTCGGAATCTTGGGTTTCTTAATCTCTCCGACAATGCCTTGGCGGGAAAAGTACCTGATAATTTGTCGAACATGCAAAACCTAACTGTTGCATCATTGAAGAACAATTACTTGTCCGGTTTTCTTCCCAGCGGGCTGCGAAGATTGCAGTTTTTGGATCTGTCTTCGAACTTGCTGAACGGGACTCTGCCTCTAGATTTCGGTGGTGATATCATGCTTTACTTGAACATCTCTTACAACAGATTTTTTGGGAAAATTCCACCGGAATTCGCGGAGAAAATTCCCAGCAATGCCACTGTTGACATCTCCTTCAATAACCTCACCGGCCAGGTTCCCGATTCTGCTGTGCTGTTGAATCAGAATCCCAAGTCCTTCACCGGTAACGCTGATCTATGTGGAGAAGCAACTAAGAATCCGTGTCCCATTCCTTCTTCGCCGTCATCTGAACCTAAAGCGTCTTCTCCTCCTGCAATTGCTGCTATGCCAAAGACGTTTGATTCTCCAATGGCACCAAATGGATCTTCGAAGCAAAAACAAAGTGGTCTCAGACGAGGAACGGTTATCGGCATCGTGGTGGGAGATATTGTTGGCATTGGAATTTTAGCTACCATCTTCGTGTACGTTTACAGGTTGAAGAGAAAGAAGGACGTAGAGAGTGAAATAAAACACGAAGCAGCCATAGCAAAGAGTGAAAGTTCATCTTCAACCTCAGAGTCAAGAGGATTTACGAGGTGGTCGTGTCTGAGAAAAAGAGCTGAAGAAGAAGAATTCTCAGAATCAACAAACTCTTCTGACAGTGATGTAGAAGGTGGTGCACATGAGGGGCAAAACGAGAAGGGCAACGAAAATCAAAGACAAGGACAAGACAAAACGGGAACTTTGGTTACTGTTGATGGTGAACGAGAGCTTGAAGTGGAAACGCTTCTTAAGGCTTCGGCGTATATACTGGGTGCCACTGGCTCCAGCATAATGTACAAGGCTGTGCTCGAGGATGGAACTTCGTTGGCGGTTCGGAGAATCGGGGAGAGTGGCGTGGAGCGATTCAAGGACTTCGAAAACCAGGTTCGGGTCATAGCTAAACTGGTCCACCCCAACCTGGTTCGCGTTCGTGGATTCTATTGGGGACTTGACGAGAAACTCATCATCTATGATTTCGTTCCAAATGGTTGCCTTGCCAATGTTCGTTACAGGAAGGTGGGCTCCTCGCCGAGTCATTTACCGTGGGAAATTAGGCTCAAGATAGCGAAAGGGGTGGCACGTGGCCTTGCGTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCTAGCAATGTTCTGTTGGGGAACGACATGGAGCCCAAGATTGGAGACTTCGGGCTCGAGAGAATTGTGACGGGGGATACTAGTTATAAGGCTGGAGGATCAGCGCGTATTTTTGGGAGCAAGAGATCCACCGCCTCAAGAGATAGTTTCCAAGATATTACATTTGGGCCCAGCCCAAGCCCGAGCCCCAGCTCAATAAGTGGTGTATCTCCTTACCATGCTCCGGAGTCGCTCAGGAACCTGAAGCCTCACCCCAAGTGGGATGTCTACTCTTTCGGGGTCATGTTTCTTGAGCTTCTCACGGGGAAGATTGTGATTTTGGATGACGTGGGCCAAGGGCCTGGGCTTTTGGTTGAGGATAAGAACCGGGCCTTGCGGATGGTTGACGTGGCTATTCGTGCTGACATGGAGGGTAAGGAGGAGGCCTTGTTGGCTTACTTCAAGTTAGGGTATAGTTGTGTGTCTAGTGTTCCAACGAAAAGGCCCCCAATGAAAGAGGTACTACAAGCTCTTGAAAAGGTCTCATCCTCATCGTTATCCTCGTATTATTATAGCCTCTGA 2322 0.4806 MSHHSVGLLFQPLIIAFALLLTVNKCNGLSRDGVLLLSFKYAVLNDPLYTLANWNYSDETPCSWRGVSCSTVAGETNGTQNRVTSLSLPNSQLLGSIPSDLGSIEHLEILDLSNNSLNGSLPSSLSQASQLRFLNLSNNLITGEVPESLTQLRNLGFLNLSDNALAGKVPDNLSNMQNLTVASLKNNYLSGFLPSGLRRLQFLDLSSNLLNGTLPLDFGGDIMLYLNISYNRFFGKIPPEFAEKIPSNATVDISFNNLTGQVPDSAVLLNQNPKSFTGNADLCGEATKNPCPIPSSPSSEPKASSPPAIAAMPKTFDSPMAPNGSSKQKQSGLRRGTVIGIVVGDIVGIGILATIFVYVYRLKRKKDVESEIKHEAAIAKSESSSSTSESRGFTRWSCLRKRAEEEEFSESTNSSDSDVEGGAHEGQNEKGNENQRQGQDKTGTLVTVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGLDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNVLLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVILDDVGQGPGLLVEDKNRALRMVDVAIRADMEGKEEALLAYFKLGYSCVSSVPTKRPPMKEVLQALEKVSSSSLSSYYYSL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0107 773 MobiDBLite consensus disorder prediction 375 394 - -
Apr3g0107 773 Gene3D Phosphorylase Kinase; domain 1 428 536 - -
Apr3g0107 773 Pfam Protein kinase domain 467 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0107 773 PRINTS Leucine-rich repeat signature 107 120 - -
Apr3g0107 773 PRINTS Leucine-rich repeat signature 197 210 - -
Apr3g0107 773 Gene3D Transferase(Phosphotransferase) domain 1 538 769 - -
Apr3g0107 773 MobiDBLite consensus disorder prediction 636 659 - -
Apr3g0107 773 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 16 763 - -
Apr3g0107 773 ProSiteProfiles Protein kinase domain profile. 461 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0107 773 PANTHER BNAC07G16060D PROTEIN 16 763 - -
Apr3g0107 773 SUPERFAMILY L domain-like 34 284 - -
Apr3g0107 773 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Apr3g0107 773 MobiDBLite consensus disorder prediction 287 332 - -
Apr3g0107 773 MobiDBLite consensus disorder prediction 636 658 - -
Apr3g0107 773 MobiDBLite consensus disorder prediction 379 394 - -
Apr3g0107 773 SUPERFAMILY Protein kinase-like (PK-like) 466 759 IPR011009 -
Apr3g0107 773 MobiDBLite consensus disorder prediction 422 436 - -
Apr3g0107 773 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Apr3g0107 773 Gene3D Ribonuclease Inhibitor 29 196 IPR032675 -
Apr3g0107 773 MobiDBLite consensus disorder prediction 404 447 - -
Apr3g0107 773 Gene3D Ribonuclease Inhibitor 197 293 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0107 Apr-Chr3 1877209 1880470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0107 15 771 Receptor kinase-like Gene Family AT4G37250 58.387 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr3g0107 Pkinase 8.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0107 - - gmx:100776204 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0107 3 1877209 1880470 Apr3g0107 3 1877209 1880470 ECH