Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0104 ATGGAAGCGGTTACTTATCCAATCCCCTCTACCAAATTCCAACCGCTTCATATTTACACCAGAGCTACGAGAATTCGATCCTCCAAGCTCTCTCTTCGCTCGCCCCCAATTTCAATCAAACCTTTGTATTCCTCCAAATTTCTCATTCTCCATCACCACAGGCTTCGTTGCGTCGCTGAATCCACCAGTAACCACCACCATCACTATCACCATCACAATCACAATCACACTGATCAGAACCACGACCATGAACACGACCATGACCACCATCACCACTCGCACGGCATCGATGGCACTAATCTTACAGGGCCTCAAAGAGCGATTATCGCGTTCGCCAAAGCCACCAGATGGATGGACTTGGCAAATGTCCTGAGGGAGCACTTGCATCTCTGCTGCTTCTCCGCCGCTTTATTTGTCGTCGCCGCCATTTGCCCTCATACCTTGCCCAAGCCCCTCGTCAAGCCTTTCCAAAATTCTCTCATCTTCGTCGCCTTTCCTTTTGTTGGGGTTTCTGCATCGCTTGATGCTCTTATTGAGATTAGTGGTGGAAAGGTGAACATCCATGTATTAATGGCAATGGCAGCTTTTGCGTCCATATTCATGGGAAACTCTTTGGAAGGAGGGTTACTTCTTGCCATGTTTAATCTCGCCCACATAGCCGAAGAGTATTTCACCAGCCGTTCAATGGTTGATGTTAAAGAGTTGAAAGAAAATAATCCAGATTTTGCCCTTGTTCTAGATACGAATGATGATAAACTTCCCAAAACATTCGACTTGGCATACCAGAGGGTTCCTGTGCATGATGTAACTGTAGGATCATATATTCTGGTTGGGGCTGGTGAGTCTGTGCCAGTAGATTGTGAAGTATTCCAAGGCAGTGCCACAATTACTATCGAGCACTTGACAGGGGAAGTCAAACCTTTGGAGGCCCAAGCTGGAGATAGAATTCCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTGAAGGTAACAAAAACATGGAAGGAATCAACTCTCAGCAGAATTGTTCAATTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTCGATGAATTTGGTGAACAATATAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATTGCTGTTATTGGGCCACTTGTATTTAAGTGGCCATTCATTAGTACTTCTGCTTGCAGAGGTTCAATTTACCGAGCCTTAGGGCTTATGGTGGCAGCATCACCTTGTGCCTTGGCTGTGGCCCCCTTGGCATATGCAACAGCAATCAGCTCCTGTGCCAGAAAGGGGATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTCATACTATTGCATTTGACAAAACAGGGACGTTAACAACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTATGGTCATCATGTAAGAAACAATGGATCAAACATTTCTTCATGTTGCATTCCCACCTGTGAAAAAGAAGCTCTCGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCACCCAATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTCGAGTACTTTCCTGGTAGAGGCCTTACTGCAACTGTTAACAGCATTGAGTCAGGAACTGGATGTGCTAAACTATTGAAAGCGTCACTTGGGTCGATAGATTTTATCACTTCATTTTTTCAATCTGAAAATGAGTCAAAGAAGATCAAGGAAGCTGTTAATACATCTTCTTACGGAAGTGAATTTGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTAACCTTGATTCACCTAGAGGATAGACCTCGGCCTGGGGTTTTTAATGTTATTCAAGAATTGCAAACTGAAGCAAAGTTTCGTGTGATGATGTTAACTGGTGATCATGAGTCTAGTGCAAGAAGAGTTGCAAGTGCAGCAGGCATCAATGAGTTTTATTGCAACCTTAAGCCTGAAGATAAGCTGAGTCATGTAAAGGATATCGCGAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGGATCAATGATGCCCCAGCACTTGCTGCTGCAACTGTTGGGATCGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCTGTTGCAGATGTATTATTGCTTCGTGAAAATATTTCTGCAGTGCCATTTTGTATTGCCAAGTCTCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTAGCATTGACATGCATTGTCATGGCTTCCCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTCCTTTTACACGAAGGTGGAACCCTGCTTGTTTGTCTCAATTCCATACGTGCTTTGAATGAACCATCTTGGTCCTGGAAGCAGGATATGTTACATTTGATTAGCGAGGCATCTTTTTCATCCTGA 2430 0.4424 MEAVTYPIPSTKFQPLHIYTRATRIRSSKLSLRSPPISIKPLYSSKFLILHHHRLRCVAESTSNHHHHYHHHNHNHTDQNHDHEHDHDHHHHSHGIDGTNLTGPQRAIIAFAKATRWMDLANVLREHLHLCCFSAALFVVAAICPHTLPKPLVKPFQNSLIFVAFPFVGVSASLDALIEISGGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMVDVKELKENNPDFALVLDTNDDKLPKTFDLAYQRVPVHDVTVGSYILVGAGESVPVDCEVFQGSATITIEHLTGEVKPLEAQAGDRIPGGARNLDGRIIVKVTKTWKESTLSRIVQLTEEAQSNKPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLVFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYATAISSCARKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPIYGHHVRNNGSNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLTATVNSIESGTGCAKLLKASLGSIDFITSFFQSENESKKIKEAVNTSSYGSEFVHAALSVNQKVTLIHLEDRPRPGVFNVIQELQTEAKFRVMMLTGDHESSARRVASAAGINEFYCNLKPEDKLSHVKDIARDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALTCIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRALNEPSWSWKQDMLHLISEASFSS* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0104 809 CDD P-type_ATPase_HM 131 785 - -
Apr3g0104 809 Pfam haloacid dehalogenase-like hydrolase 451 696 - -
Apr3g0104 809 SUPERFAMILY HAD-like 451 783 IPR036412 -
Apr3g0104 809 SUPERFAMILY Calcium ATPase, transduction domain A 261 346 IPR008250 -
Apr3g0104 809 Pfam E1-E2 ATPase 260 433 - -
Apr3g0104 809 Gene3D - 446 734 IPR023214 -
Apr3g0104 809 MobiDBLite consensus disorder prediction 75 96 - -
Apr3g0104 809 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 187 785 IPR027256 GO:0006812|GO:0016021|GO:0019829
Apr3g0104 809 Gene3D - 464 614 IPR023299 GO:0000166
Apr3g0104 809 SUPERFAMILY Calcium ATPase, transmembrane domain M 189 768 IPR023298 -
Apr3g0104 809 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 260 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g0104 809 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 582 763 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr3g0104 809 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 59 806 - -
Apr3g0104 809 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Apr3g0104 809 SFLD C1.7: P-type atpase like 435 736 - -
Apr3g0104 809 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Apr3g0104 809 PRINTS P-type cation-transporting ATPase superfamily signature 606 617 - -
Apr3g0104 809 PRINTS P-type cation-transporting ATPase superfamily signature 629 639 - -
Apr3g0104 809 PRINTS P-type cation-transporting ATPase superfamily signature 683 702 - -
Apr3g0104 809 PRINTS P-type cation-transporting ATPase superfamily signature 707 719 - -
Apr3g0104 809 MobiDBLite consensus disorder prediction 62 101 - -
Apr3g0104 809 SFLD p-type atpase 435 736 IPR044492 -
Apr3g0104 809 Gene3D - 225 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0104 Apr-Chr3 1803989 1821691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0104 104 804 Primary Pumps ATPases AT4G37270 78.031 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0104 K01534 - gmx:100776309 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0104 3 1803989 1821691 Apr3g0104 3 1803989 1821691 ECH