Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0100 ATGGCCATTCTTCAGCTCCATACAATTCAACACTCTCTGTTTATAGTACTTGTTTTTCTTCTTCAGTTTTCATCTTCACTCGGGTACAAATTCCCAGATAAGTACTTCATCAATTGTGGGTCAAGTAGCGATGTTACTGAAAGTGGTAAGGGTTATGTTGGTGAATCAAACCCTGACTACCCTGCAACGCATTTTACCAACAGCAAGACAGAGAGCAGTGAGTCATCCGTGTCTTCTCCTCTCTACCAAACAGCAAGGATTTTTAAAAATGAATCTTGGTATGAGTTCAGCACGGAGACAAACGGCACCTACCTGCTACGCCTCCATTTCTTCGCTTTCTCTTCCTCGAGTAATCTTTCCTCTGCTAGGTTTAACGTTTCCATTCCTAGGTTCTGGCTGTTGAAAAATTTCGATGCCAGCAATGGTACTAACAACTCTGTTTTAATAAAAGAGTTTTTCATGAAAAGCACTGCCTCCAGCATCAGAATCACCTTCAGACCTCTGTCATCATCATTTGCGTTTGTGAATGCTATAGAACTATTTGTACTGCCCCTCCTTTTGATCGCAAATGATGTCACGGGTTTCAATTATAATCGCCGTCCCTTAGGCTTAAATTATTACAGTGGTTTGCTCACTCGGGTGTTAGAGACCAGACACAGGCTTAATGTCGGTGGCCAACCAGTCGCAAGGGACCATGATAATTTACTCAGAAACTGGATTACAGATGATAGGTATCTCACGAATCCAGCAAACGCTAAGAATAGTACCCCTTATGAAGGTCAAATTCAGTACCATGTGAGTGATGACTCTGATGGTCCAAACTCAGGTAAATTTACTGCACCAAGTGATGTCTACGGAACTGCTAAAGAGATCAACAACAACACTAACCTGTCAAACATCACGTGGAGTCTGCCGGTAGAGAAGAACACGGATCATCTCCTTCGCCTTCACTTCTGTGACTTTTGGAATCAACAGGCTTTTCTTACAATTTTCACTATGTACATTTACGATAGCTATGTTATGCCGGTGAATAATGACACCATTTTATCTAGTCAGGTGCCTGCCCCTTATTATTATGATTTTGTGGTTACCTCTGATGAATCTGGGTTTATGAAGATCAGTGTAGCACCTATTATTGCAAATGTTTCCAAACCGAATGCATTTTTAAATGGGCTAGAAATAATGAAAATGATTGAGTCCTCAGATTCTGTTCCCATGTACCTGTACCAATCCAATCACAATAATCTTCCATTGGTGCTGGGTTCAATTCTTGGAGGTTTGGTCCTGATTTTGGTGGTGGCGGTGCTTGGGTTTCTTTGGCGTCTTAAAATCAGGAAGCAAAAGCCCGTAGAGAACTCGGATTGGTTGCCAGTTCCCATGACTGCAGGAGGAAGTTCTCACAGCAGATTGACTGAGGGAACCATCCAAGGCTCCCCTCTTCACATAAATCTTGGGCTGAAAATTCCCTTGCTTGATCTTCAGTTGGCAACCAAGAACTTCCATGCTAGTCAGATAATTGGCAAGGGTGGTTTTGGCCACGTCTATAAGGGAGTTCTCAAGAATGGCATGAGAGTGGCTGTGAAAAGGGGTGAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTGTTGTCCAAGATTCGTCACAGGCACCTTGTTTCCTTAATTGGGTATTGTGATGAAAGGTATGAGATGATACTGGTTTATGAGTATATGGAGAAGGGCACACTCAGGGACCATTTGTATAATACAAATTTGCCAAGTTTGTCTTGGAAGCTAAGGCTTGAAATTTGTATTGGAGCTGCCAGAGGTCTTCATTACCTTCACAAGGGAGCCGCTGGTGGAATTATTCACCGTGATGTGAAGTCCACTAACATATTGCTTGATGAGAACCACGTGGCTAAAGTTGCTGACTTTGGCCTTTCAAGGACAGGTCCTCTTGATCATCAACCATATGTTAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTTAGGTCACAACAGCTGACAGAAAAATCTGATGTGTATTCATTTGGGGTAGTTCTTCTGGAAGTGTTATGTGCAAGACCAGTCATTGACCCGTCGCTTCCTAGAGATCAGATAAACTTGGCTGAGTGGGGAATGTTTTGCAAAAACAAGGGGATAATCGAAGACATCATTGATCTTTCCATCAAGGGCCAAATAGATCAGAACTCACTTAGAAAATTTAGTGAGACGGTAGAAAAATGCTTACAAGATGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCACTGCAGCTTCAGAGAGGAGCAAATGCTATACAAAGAGAGCCTCATGAGGATAGTTCAAGCAGTGCTTCTGCATCACTTCAATTGCCCAATGTTAGGCGCCTTCCTTCACTCTCCACTCTAAGTGAAGTGGATGACTCGTCCATTGTGAGGGTTGATGAATCAGATAGTGCAGCAGATTCCGTTTTCTCTCAGTTGAAAATTGATGATGCCAGGAAGTGA 2538 0.4295 MAILQLHTIQHSLFIVLVFLLQFSSSLGYKFPDKYFINCGSSSDVTESGKGYVGESNPDYPATHFTNSKTESSESSVSSPLYQTARIFKNESWYEFSTETNGTYLLRLHFFAFSSSSNLSSARFNVSIPRFWLLKNFDASNGTNNSVLIKEFFMKSTASSIRITFRPLSSSFAFVNAIELFVLPLLLIANDVTGFNYNRRPLGLNYYSGLLTRVLETRHRLNVGGQPVARDHDNLLRNWITDDRYLTNPANAKNSTPYEGQIQYHVSDDSDGPNSGKFTAPSDVYGTAKEINNNTNLSNITWSLPVEKNTDHLLRLHFCDFWNQQAFLTIFTMYIYDSYVMPVNNDTILSSQVPAPYYYDFVVTSDESGFMKISVAPIIANVSKPNAFLNGLEIMKMIESSDSVPMYLYQSNHNNLPLVLGSILGGLVLILVVAVLGFLWRLKIRKQKPVENSDWLPVPMTAGGSSHSRLTEGTIQGSPLHINLGLKIPLLDLQLATKNFHASQIIGKGGFGHVYKGVLKNGMRVAVKRGEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYNTNLPSLSWKLRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPRDQINLAEWGMFCKNKGIIEDIIDLSIKGQIDQNSLRKFSETVEKCLQDDGSDRPTMGDVLWDLEYALQLQRGANAIQREPHEDSSSSASASLQLPNVRRLPSLSTLSEVDDSSIVRVDESDSAADSVFSQLKIDDARK* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0100 845 SUPERFAMILY Protein kinase-like (PK-like) 482 771 IPR011009 -
Apr3g0100 845 PANTHER OS07G0166700 PROTEIN 26 806 IPR045272 GO:0004714|GO:0006468
Apr3g0100 845 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Apr3g0100 845 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0100 845 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0100 845 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Apr3g0100 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Apr3g0100 845 CDD STKc_IRAK 506 771 - -
Apr3g0100 845 Gene3D Transferase(Phosphotransferase) domain 1 576 795 - -
Apr3g0100 845 Gene3D - 34 182 - -
Apr3g0100 845 Gene3D - 215 398 - -
Apr3g0100 845 Gene3D Phosphorylase Kinase; domain 1 464 575 - -
Apr3g0100 845 PANTHER BNAC03G27170D PROTEIN 26 806 - -
Apr3g0100 845 Pfam Malectin-like domain 37 397 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0100 Apr-Chr3 1736634 1741448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0100 12 844 Receptor kinase-like Gene Family AT2G23200 44.832 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr3g0100 Malectin_like 2e-25 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0100 - - gmx:100789555 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0100 3 1736634 1741448 Apr3g0100 3 1736634 1741448 ECH