Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0099 ATGGCCATTCTTCAGCTCCATACAACTCAACACACTCTGTTTACAGTACTTGTTTTTCTTCTTCAGTTTTCATCTTCACTCGGGTACAAATTCCCAGATAAGTACTTCATCAATTGTGGGTCAAGTAGCGATGTTACTGAAAGTGGTAAGGGTTATGTTGGTGAATCAAACCCTGACTACCCTGCAACGCATTTTACCAACAGCAAGACAGAGAGCAGTGAGTCATCCGTGTCTTCTCCTCTCTACCAAACAGCAAGGATTTTTAAAAATGAATCTTGGTATGAGTTCAGCACGGAGACAAACGGCACCTACCTGCTACGCCTCCATTTCTTCGCTTTCTCTTCCTCGAGTAATCTTTCCTCTGCTAGGTTTAACGTTTCCATTCCTAGGTTCTGGCTGTTGAAAAATTTCGATGCCAGCAATGGTACTAACAACTCTGTTTTAATAAAAGAGTTTTTCATGAAAAGCACTGCCTCCAGCATCAGAATCACCTTCAGACCTCTGTCATCATCATTTGCGTTTGTGAATGCTATAGAACTATTTGTACTGCCCCTCCTTTTGATCGCAAATGATGTCACGGGTTTCAATTATAATCGCCGTCCCTTAGGCTTAAATTATTACAGTGGTTTGCTCACTCGGGTGTTAGAGACCAGACACAGGCTTAATGTCGGTGGCCAACCAGTCGCAAGGGACCATGATAATTTACTCAGAAACTGGATTACAGATGATAGGTATCTCACGAATCCAGCAAACGCTAAGAATAGTACCCCTTATGAAGGTCAAATTCAGTACCATGTGAGTGATGACTCTGATGGTCCAAACTCAGGTAAATTTACTGCACCAAGTGATGTCTACGGAACTGCTAAAGAGATCAACAACAACACTAACCTGTCAAACATCACGTGGAGTCTGCCGGTAGAGAAGAACACGGATCATCTCCTTCGCCTTCACTTCTGTGACTTTTGGAATCAACAGGCTTTTCTTACAATTTTCAATATGTTCATTTACGACAGCTACTTTATGCAAGTGAATAATGACACCATTGTATCTAGTCAGGTGCCTGCTCCTTGTTATTATGATTTTGTGGTTACCTCTGATGAATCTGGGTTTATGAACATCAGTGTAGCACCTATTATTGCAAATGTTTCCAAACCGAATGCATTTTTAAATGGGCTAGAAATAATGAAAGTGATTGAGTCCTCAGATTCTGTTCCCATGGACCTGGAGCAATCCAATCACAATAATCTTCCATTGGTGCTGGGTTCAATTCTTGGAGGTTTGGTCATGATATTTGTTGTGATGGTGCTTCTGTTTCTCTGGCCTGTTAAAATCAGAAGGCAAAAGCGCGTTGAAAATTCCAATCCACTGTCAATTCTCGTTACTGCTGGAGGGAGTTCTCACGCCATAAATATTAGACTCAAACTTCCTTTGCTTGATCTTCGATTGGCAACAAACAACTTCGATGCAAATCAAATAATTGGCACGGGTGGTTTCGGCAGCGTGTATATGGGAGTTCTAAAAAATGGCCTGAGAGTGGCTGTGAAAAGGAGTGAGTCAGGGTACTCAGGTCAAGGCCTTTCTGAATTTCAGACGGAGATCATAGTTTTGTCCAAGATTCGTCACAAACACCTTGTTTCCTTAATTGGGTATTGTGACGAAAGAGGTGAGATGATATTAGTTTACGAGTTCATGGAAAAAGGGACACTGAGAGACCATTTGTACAATACAAATTTGCCAAGCTTATCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCCGCCAGAGGTCTTCATTATCTTCACAAAGGAGTTGCTGGGGGAATCATTCACCGCGACGTGAAGTCCACCAACATATTGCTTGATGAGAATTACGAGGCTAAAGTAGCTGACTTTGGCATTTCAAGAACAGGTCCAGTTAATCTTGAACCATATGTCAGCACAGATGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTTGCAAAAATTAACAGAAAAATCTGACGTGTATTCATTTGGGGTAGTTCTTCTGGAAGTTTTGTGCGCAAGACCAGCCATTGACCCATCGCTTCCAAGGGAGCTGGTGAATTTGGCTGAATGGGGATTGTTTTGCAAAAACAAGGGGATACTCGATCACATCATTGATCCTTCCATCAAGGGCCAAATTGATCAAAACTCGCTAAGAAAGTTTAGTGAGACGGTAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGAGGTGTTGTGGGACTTGGAGTATGCACTGCAGCTTCAGAGAGGTGCAAATGCAATACAAAGAGAGCCTCACGAGGATAGTTCAAGCAGTGCTTCTGCATCACTTCAATTGCCCAATGTTAGGTGTCTTCCTTCACTATCCACTCTAAGCGAAGTGGATGGCTCGTCCATTGTGTGGGGTGAAGAATTCGATGGTGCAGCAATATCCAATGAAAAATCATGA 2478 0.4233 MAILQLHTTQHTLFTVLVFLLQFSSSLGYKFPDKYFINCGSSSDVTESGKGYVGESNPDYPATHFTNSKTESSESSVSSPLYQTARIFKNESWYEFSTETNGTYLLRLHFFAFSSSSNLSSARFNVSIPRFWLLKNFDASNGTNNSVLIKEFFMKSTASSIRITFRPLSSSFAFVNAIELFVLPLLLIANDVTGFNYNRRPLGLNYYSGLLTRVLETRHRLNVGGQPVARDHDNLLRNWITDDRYLTNPANAKNSTPYEGQIQYHVSDDSDGPNSGKFTAPSDVYGTAKEINNNTNLSNITWSLPVEKNTDHLLRLHFCDFWNQQAFLTIFNMFIYDSYFMQVNNDTIVSSQVPAPCYYDFVVTSDESGFMNISVAPIIANVSKPNAFLNGLEIMKVIESSDSVPMDLEQSNHNNLPLVLGSILGGLVMIFVVMVLLFLWPVKIRRQKRVENSNPLSILVTAGGSSHAINIRLKLPLLDLRLATNNFDANQIIGTGGFGSVYMGVLKNGLRVAVKRSESGYSGQGLSEFQTEIIVLSKIRHKHLVSLIGYCDERGEMILVYEFMEKGTLRDHLYNTNLPSLSWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENYEAKVADFGISRTGPVNLEPYVSTDVKGTFGYLDPEYFRLQKLTEKSDVYSFGVVLLEVLCARPAIDPSLPRELVNLAEWGLFCKNKGILDHIIDPSIKGQIDQNSLRKFSETVEKCLQEDGSDRPTMGEVLWDLEYALQLQRGANAIQREPHEDSSSSASASLQLPNVRCLPSLSTLSEVDGSSIVWGEEFDGAAISNEKS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0099 825 Gene3D Phosphorylase Kinase; domain 1 460 563 - -
Apr3g0099 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Apr3g0099 825 Pfam Malectin-like domain 37 397 IPR024788 -
Apr3g0099 825 ProSiteProfiles Protein kinase domain profile. 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0099 825 CDD STKc_IRAK 493 759 - -
Apr3g0099 825 SUPERFAMILY Protein kinase-like (PK-like) 472 759 IPR011009 -
Apr3g0099 825 Gene3D Transferase(Phosphotransferase) domain 1 564 783 - -
Apr3g0099 825 Gene3D - 215 398 - -
Apr3g0099 825 Gene3D - 34 182 - -
Apr3g0099 825 PANTHER OS07G0166700 PROTEIN 26 793 IPR045272 GO:0004714|GO:0006468
Apr3g0099 825 SMART serkin_6 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0099 825 Pfam Protein tyrosine and serine/threonine kinase 490 755 IPR001245 GO:0004672|GO:0006468
Apr3g0099 825 PANTHER BNAC03G27170D PROTEIN 26 793 - -
Apr3g0099 825 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0099 Apr-Chr3 1724889 1727837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0099 16 800 Receptor kinase-like Gene Family AT2G23200 44.322 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr3g0099 Malectin_like 5.9e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0099 - - gmx:100789555 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0099 3 1724889 1727837 Apr3g0099 3 1724889 1727837 ECH