Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0079 ATGGGTTCGTTTCTAAAATCTTTCCTTCTGATAATTCTCTCCTTTCTGTTTCTGGGTCTCTATGATGTGTCCCTAGCGGCAACGGAGAACCAGAAGAGCACTTACATAGTACACGTGGCAAAATCCGAAATGCCGGAAAGCTTCGACCACCACACACAGTGGTACGAGTCGTCTCTGAAATCCGTGTCCGACACAGCAGAAATGCTGTACACCTACGACAGCGCGATCCACGGATACGCCACGAGATTAACGGAGGAAGAAGCACGTTTGCTTGAGAGCCAAACGGGGATTCTAGCGGTGTTGCCTGAGTTAAGATACGAGCTTCACACAACGAGGACACCTCAGTTTCTTGGACTGGACAAGAGCGCCGACATGTTCCCTGAGGCAAGTTCAGGGAGCGATGTTATCATTGGAGTCCTCGACACTGGTGTTTGGCCCGAAAGCAAGAGCTTTGACGACACTGGACTCGGACCCATTCCCAGTGGCTGGAAAGGCGAGTGCGAAACGGGTACAAATTTCACCGCTTCCAACTGTAACAGAAAGTTGATAGGAGCAAGGTTCTTTTCAAAGGGTTGTGAGGCCATGTTGGGTCCAATCGATGAAACCAAAGAGTCTAAATCTCCGCGTGACGACGATGGCCACGGAACTCATACCGCGAGCACAGCCGCGGGTTCGGTGGTTTCGGGCGCCAGCTTATTCGGCTACGCGGCTGGGACGGCGCGTGGGATGGCCACGCACGCTAGAGTCGCTGCTTACAAGGTTTGCTGGGCCGGAGGGTGTTTCAGCTCCGACATTTTGGCTGCGATCGAAAGGGCAATTTCGGACAACGTTAATATGATGTCTTTATCGCTCGGTGGTGGAATGGCTGATTTTTACAGAGACAGTGTCGCTATTGGAGCTTTTGCGGCAATGGAGAAAGGGATTCTTGTGTCTTGCTCCGCTGGGAACGCGGGTCCCAGTCCCTATAGTCTCTCCAATGTGGCACCGTGGATCACTACCGTGGGCGCTGGCACTCTGGATCGTGACTTCCCGGCTTATGTTAGCCTCGGAAATGGACTTAACTACTCTGGTGTGTCACTCTACCGTGGCAATGCTTTACCCGATTCTCCTTTGCCATTTGTTTACGCAGGGAATGCTAGTAACGCCACCAACGGTAATTTGTGCGTGACGGGCACCTTGACGCCGGAGAAAGTCGCCGGAAAGATTGTGTTGTGCGACCGTGGATTGACCGCCAGGGTTCAGAAAGGGGCGGTGGTGAAATCCGCCGGAGGTTTGGGCATGGTGCTGAGCAACACCGCCGCTAACGGCGAAGAACTGGTTGCCGACGCTCATCTTTTGCCGGCGACGGCGGTGGGTGAAAGAGCCGGCGATGCCATCAAAAAGTATCTGTTTTCTGACATGAAACCGACGGTGAAGATTTTGTTTGAGGGAACTAAGGTGGGAATTCAGCCATCTCCGGTGGTTGCAGCGTTTAGCTCTCGAGGCCCGAACTCAATCGTCCCGCAGATCCTGAAACCCGACCTGATCGCGCCAGGTGTCAACATCTTAGCAGGGTGGTCCAGGGCCGTGGGTCCCACCGGGCTAACCGTTGATGAAAGGCGCGTGGATTTCAACATCATTTCAGGCACGTCCATGTCCTGCCCTCACGTGAGTGGTCTAGCCGCGTTGATAAAATCGGCTCACCCGGAGTGGAGCCCAGCCGCGATTCGATCGGCTCTTATGACAACGGCTTATACGGCTTACAGAAACGGTCAGAAATTGCAGGACAGTGCTTCGGGGAAACCATCCACACCGTTCGATCACGGAGCTGGACACGTGGATCCCGTAGCTGCCCTTAATCCGGGACTGGTGTATGATCTGACGGTGGATGATTACCTAGGCTTCCTCTGTGCACTGAACTACACAGCCTCTGAAATCGCAACACTGGCAAAGAGAAAATTCCAGTGCAACGCGAGCAAGCAATACAGTGTGACTGAGCTTAATTACCCTTCATTTGCGGTGGTGTTTGACAGTGGGTCCAGCGTAGTTAAACACGCGCGAATTCTCACTAACGTGGGGCCCGCGGGAACGTACAAGGTTTCCATGACGTCAGATACACCGTCCGTGAAAATCTCGGTTGAACCGCAAGTGTTGAGTTTCAAGGAGAACGAGAAGAAAAGTTTTACCGTTACCTTTACTTCCTCGGGTTCGCCCCAACAGAAGGTGAATGCTTTTGGGCGGTTGGAATGGTCTGATGGGAAGCACGTGGTTGGAACCCCAATTTCGATTAATTGGGGTTGA 2280 0.5303 MGSFLKSFLLIILSFLFLGLYDVSLAATENQKSTYIVHVAKSEMPESFDHHTQWYESSLKSVSDTAEMLYTYDSAIHGYATRLTEEEARLLESQTGILAVLPELRYELHTTRTPQFLGLDKSADMFPEASSGSDVIIGVLDTGVWPESKSFDDTGLGPIPSGWKGECETGTNFTASNCNRKLIGARFFSKGCEAMLGPIDETKESKSPRDDDGHGTHTASTAAGSVVSGASLFGYAAGTARGMATHARVAAYKVCWAGGCFSSDILAAIERAISDNVNMMSLSLGGGMADFYRDSVAIGAFAAMEKGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVSLGNGLNYSGVSLYRGNALPDSPLPFVYAGNASNATNGNLCVTGTLTPEKVAGKIVLCDRGLTARVQKGAVVKSAGGLGMVLSNTAANGEELVADAHLLPATAVGERAGDAIKKYLFSDMKPTVKILFEGTKVGIQPSPVVAAFSSRGPNSIVPQILKPDLIAPGVNILAGWSRAVGPTGLTVDERRVDFNIISGTSMSCPHVSGLAALIKSAHPEWSPAAIRSALMTTAYTAYRNGQKLQDSASGKPSTPFDHGAGHVDPVAALNPGLVYDLTVDDYLGFLCALNYTASEIATLAKRKFQCNASKQYSVTELNYPSFAVVFDSGSSVVKHARILTNVGPAGTYKVSMTSDTPSVKISVEPQVLSFKENEKKSFTVTFTSSGSPQQKVNAFGRLEWSDGKHVVGTPISINWG* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0079 759 Pfam Fibronectin type-III domain 659 756 IPR041469 -
Apr3g0079 759 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Apr3g0079 759 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Apr3g0079 759 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Apr3g0079 759 MobiDBLite consensus disorder prediction 199 221 - -
Apr3g0079 759 Gene3D - 340 481 - -
Apr3g0079 759 MobiDBLite consensus disorder prediction 199 216 - -
Apr3g0079 759 Gene3D - 629 758 - -
Apr3g0079 759 Pfam Subtilase family 132 588 IPR000209 GO:0006508|GO:0008236
Apr3g0079 759 ProSiteProfiles Serine proteases, subtilase domain profile. 105 612 - -
Apr3g0079 759 CDD PA_subtilisin_like 346 473 - -
Apr3g0079 759 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 757 - -
Apr3g0079 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Apr3g0079 759 SUPERFAMILY Subtilisin-like 108 616 IPR036852 GO:0004252|GO:0006508
Apr3g0079 759 Gene3D Peptidase S8/S53 domain 134 625 IPR036852 GO:0004252|GO:0006508
Apr3g0079 759 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Apr3g0079 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 109 IPR037045 -
Apr3g0079 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 757 IPR045051 -
Apr3g0079 759 Pfam PA domain 386 459 IPR003137 -
Apr3g0079 759 CDD Peptidases_S8_3 106 578 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0079 Apr-Chr3 1370701 1373926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0079 7 758 Subtilisin-like Serine Gene Family AT5G67360 71.751 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0079 - - gmx:100815413 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0079 3 1370701 1373926 Apr3g0079 3 1370701 1373926 ECH
Apr7g0861 7 15624660 15633075 Apr3g0079 3 1370701 1373926 PCT