Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0070 ATGACGCAATTCACACCTCTTTTGCACCAAATCACACCCCTCTCCAACCCCAACCCTTCCATGAACAAAAACCAAATTCCTAGAACAAGACCGTGGCCTGCTACAGGGTTCCTAACATCCAAGGCTTTAACTAACTTCGGCGACACAAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATCGAAACCAATGACGTAACTCTTGCACAACAAATCCTTTGGGTCCTCAACAACATAGCACTGCCTGACGGTGACTCTAACCAACGCTTGGCCTCTGGTTTCCTTCGCGCCCTCACCGCTCGCGCAGCCAAAACGGGAACTTGCAAGATGCTCGTTGGGGTAGAAGATGCACGCACCAATTTCACCATAGACACACACAAATTCTCAGTCATCCAACTAGCCAACTTCGTTGACTTAACCCCCTGGCACCGCTTTGGTTTCACTGCGGCTAACTCCGCCATTCTAGAAGCTACCGAAGGGTTCTCTGTTATCCACATCGTTGACTTAAGTTCAACGCATTGCATGCAGATTCCCACGCTCATTGACGCCATCGCTAGCCGCCACGAGGTTCCTCCTTTAATCAAACTCACCGTGGCTAATGCAAACTGCAGAGAAATCCCACCTTTGCTTGATCTTTCATACGAAGAACTTGGAACAAAGTTGATCAATTTCGCTAGGTCGAGAAACGTTGTCATGGAATTCAGAGCGGTTTCTTCGAGTTACGAAGATGGGTTTGCGGTGTTAATTGAACAGTTAAGAGTGCAACAACAACAAAATTTAGTTTATGCTTCAGAGGCTCGTCCAAGTGAAGCTTTGGTTATAAACTGTCACATGATGCTTCATTATATCCCTGATGAAACCCTATCTTCAATTCCTGACACAAACCCGTCCTCTTATATTTATGATTTTTCTTCTATTGTTACTTCCACTTCCTCTTTGCGATCTTTGTTCCTTAAAGCACTTCGAAGTTTGGACCCAACGGTTGTGATCTTGGTTGATGAGGATGCAGATTTTACATCCAATAACTTGGTTTGTAGGCTAAAGTCAGCCTTTAACTATCTATGGATTCCGTATGACACGGTGGACACGTTTCTTCCAAGAGGGAGCAAACAAAGGCAGTGGTATGAGTCAGATATATGCTGGAAGATTGAGAATGTTATAGCGCATGAAGGGGTTCAGAGGGTAGAGAGGGTTGAGCCTAAGAACAGGTGGGAACAGCGAATGAGGAATGCAAGCTTTCAGGGAATCGCTTTCAGTGAGGACTGTGTTGCGGAGGTGAAGGCCATGTTGGATGAACATGCTGCAGGATGGGGACTGAAGAAGGAAGATGAACACATTGTGCTCACGTGGAAAGGCCATAATGTTGTTTTTGCTTCTGCTTGGTTTAATGCTTGA 1401 0.4575 MTQFTPLLHQITPLSNPNPSMNKNQIPRTRPWPATGFLTSKALTNFGDTNCMEQLLVHCANAIETNDVTLAQQILWVLNNIALPDGDSNQRLASGFLRALTARAAKTGTCKMLVGVEDARTNFTIDTHKFSVIQLANFVDLTPWHRFGFTAANSAILEATEGFSVIHIVDLSSTHCMQIPTLIDAIASRHEVPPLIKLTVANANCREIPPLLDLSYEELGTKLINFARSRNVVMEFRAVSSSYEDGFAVLIEQLRVQQQQNLVYASEARPSEALVINCHMMLHYIPDETLSSIPDTNPSSYIYDFSSIVTSTSSLRSLFLKALRSLDPTVVILVDEDADFTSNNLVCRLKSAFNYLWIPYDTVDTFLPRGSKQRQWYESDICWKIENVIAHEGVQRVERVEPKNRWEQRMRNASFQGIAFSEDCVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWFNA* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0070 466 Pfam GRAS domain family 52 463 IPR005202 -
Apr3g0070 466 PANTHER SCARECROW-LIKE PROTEIN 32 26 464 - -
Apr3g0070 466 ProSiteProfiles GRAS family profile. 43 464 IPR005202 -
Apr3g0070 466 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 464 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0070 Apr-Chr3 1241788 1243188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0070 28 463 GRAS Transcription Factor Family AT3G49950 57.727 2.07e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr3g0070 GRAS 1.6e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0070 - - gmx:100814364 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0070 3 1241788 1243188 Apr3g0070 3 1241788 1243188 ECH