Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0066 ATGGGAGAAGAATTGGGCATTATGGTGGTTGTGACTGTGAGAGAATTCGACCCAAATAAAGACAGAGAAAGAGTGGAAGCTGTTGAAAGAATATGTGAGGTTGGACCCAGTGGAAAGCTTTCCCTCTTCACCGACCTCCACGGTGACCCAATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGGTGGCGGAGATAGGTGAAGACACAGTGGGAATGATAAGGGGTTGCATAAAAACCGTTACGTGCGGAAAGAAGCTCCACAGGCATGGAAAAACCAACACCCAACCCACTTCCAAACAACTCCCCATATACACCAAACTCGCCTACATATTAGGCCTCCGCGTTTCTCCCCATCACAGGAGAATGGGAATAGGGTTGAAACTGGTCCAGAGGATGGAGAAATGGTTCAGGGACAATGGAGCCGAGTATGCTTACATGGCAACGGAAAAGGACAACGTAGCATCCGTTAAGCTATTCACCGACAAATGCGGCTACTCTAAGTTCCGTACCCCCTCTATCCTCGTCAACCCCGTTTTCGCTCACCGAGTAAAGACCTCTTCCAAAGTCACCATCATCCGACTCACCCCAAACGACGCCGAATTGCTCTACCGTAACCGATTCGCCACAACTGAGTTCTTCCCGCGCGACGTCGACTCAGTCCTCAACAACAAACTCAGCCTCGGCACCTTCCTAGCCGTTCCGCGCGGCTCCTACTCAACCGACACGTGGCCCGGTTCAGACCGCTTTCTGTCGGACCCACCTCACTCCTGGGCCGTACTCAGTGTGTGGAACTGCAAGGATGTGTTCACGCTCCAGGTGAGGGGCGCGTCGCGCGTGAAGCGGACCCTTGCCAAAACCACCCGCATGTTGGACCGAGCCATGCCCTGGCTCGGCTTGCCTTCTATCCCCAATTTCTTTCAGCCGTTTGGGTTTCACTTCCTGTATGGGCTGGGAGGTGAGGGCCCCGAGGGGGTGAAGATGGTGAGAGTTTTATGTGGATTCGCACATAACCTCGCCAAAGATGGTGGTTGCAAAGTGGTGGCTACAGAAGTTTCCAGCCACGAGCCGCTTCGGTTCGGGATTCCACACTGGAAGATGCTTTCTTGTGAAGAGGATTTGTGGTGCATTAAGAGACTTGGAGAAGATTACAGCGATGGTTCCGTTGGTGATTGGACAAAATCTCCTCCTGGATTCTCTGTTTTTGTTGATCCTAGAGAGTTCTAA 1230 0.5228 MGEELGIMVVVTVREFDPNKDRERVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLVAEIGEDTVGMIRGCIKTVTCGKKLHRHGKTNTQPTSKQLPIYTKLAYILGLRVSPHHRRMGIGLKLVQRMEKWFRDNGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPSILVNPVFAHRVKTSSKVTIIRLTPNDAELLYRNRFATTEFFPRDVDSVLNNKLSLGTFLAVPRGSYSTDTWPGSDRFLSDPPHSWAVLSVWNCKDVFTLQVRGASRVKRTLAKTTRMLDRAMPWLGLPSIPNFFQPFGFHFLYGLGGEGPEGVKMVRVLCGFAHNLAKDGGCKVVATEVSSHEPLRFGIPHWKMLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPGFSVFVDPREF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0066 409 CDD NAT_SF 62 147 - -
Apr3g0066 409 Gene3D - 43 173 - -
Apr3g0066 409 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 186 IPR000182 GO:0016407
Apr3g0066 409 Pfam Acetyltransferase (GNAT) family 56 167 IPR000182 GO:0016407
Apr3g0066 409 PANTHER N-ACETYLTRANSFERASE 9 409 - -
Apr3g0066 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 43 169 IPR016181 -
Apr3g0066 409 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 9 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0066 Apr-Chr3 1105192 1106727 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Apr3g0066 Acetyltransf_1 1.8e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0066 - - gmx:100775317 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0066 3 1105192 1106727 Apr3g0066 3 1105192 1106727 ECH
Apr7g0842 7 15443300 15444717 Apr3g0066 3 1105192 1106727 PCT