Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0064 ATGAAACCTCATCATTTCACCTTCTTTTTGATCCTATCATTGTCTCTACACATCCAAGTCCCCACTGCAAAAGGGCTCAACACAATTCAATTCCACACTCCCAATGAGTCCTACACAACAAGAAGGATCCTCCACCAGCCCTTGTTCCCGGCCGCTTCTGCTCCGCCGCCAGCCACCCCGCCGCCGCCGCCGCCAGATGACATCCCTTCTTCTCCCGACATTCCTTTTTTCAACGAGTATCCCGTCGGACCGCCGCCGCCGGTCCAGAACCAGCCGCCGGCAATCTCCACCGGCGTAATTGCGAACCCAACGGCGACGCAGCCCACGAAACCCACCAAAAAAGTCGCAATTGCGATCTCTGTGGTAATTGTGACGCTGGGTATGCTCTCTGCCCTATGCTTTTTCTTATACAAGCACAAGGCAAAGCACCCAGTGGAGAGTCAGAAGCTCGTCGGTGATGGTCGAAATTCTCGAATAGTTCTAGAAGATTCTCCGAGGGCCCCACAACCATCGAGCTTCCTCTACATTGGGACGGTGGAACCCACCAGAACGTCGGTGAGTGAACCCAATGCAGCAAACGGCTCCCCTTATCGCAAGCTCAATTCCATCAAGCTTAATTCCGATCACCGTTACCGCCCCAGCCCCGAGTTGCAGCCATTGCCACCGCTCAACAAGCCACCGGACGAGAGCCACTCGCCGCCGGCGGCATCCTCCTCCTCCTCCTCCTCCTCCGATGAGGAAAGCCGCGAGACGGCATTCCACTCGCCGCATGGCTCATCGCTCAGCCTCGAAGATAACTATTACACGCCGGTTTCGCGCCAGAGTTATCTGGCCAACGGCAGCCCCGCCGCCGCGCCGGCCGCCATGGCTCCGGTGGTTCCTTACTCGAAGAGAACATCGCCGAAATCTCGATTTTCCGCTCCGTCGCCGGATATCAGGCACGTAATCGTACCATCAATTAAGAATGCTCCGGCTCCGTCGCCGCCGTCACCACCACCAGGTTCAAACAAATATCAGCACGTTGAGAAAGAAGTGAATTCTGGTCCTTCTAGAAGGCTGAAATTCTCATCGCCTCCCCCAGCTCCGAATTTGACTCATCTTCATTCAAACGGGTCCACGACATTGCTTAAACCTCCTCCTCCTCCTCCGCCGCCGCCGCCACCGCCACGAAAGGGTTGGTCTCCGTCAATTAGTACATCCTCGTCATCTGTGTCGAAAAAGGAGCAAACGTCTTGGTCTGCAAGTGAAGGAGCAGCTTCTATTTGCAGTGTGAGTGTGAGGAAAGGTTATTCAGAGGAAGTTGAGAAGAGACGTGACGGTGATGACGTGGATGGAGCGAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACTTCAGACCGTGCCACTGTGTGGGACCAGTTAAAATCTAGCTCATTTCAGTTAAATGAGGATATGATGGAGACCCTGTTTGGCTGCAATTCAACAAGTTCTGCTCCTAAGGAGACTGTTCCTAGGAAATCAGTTCTTCCCCCTGTTGAACAGGAGAATAGGGTGTTAGACCCCAAGAAATCCCAAAATATAGCTATACTACTTAGGGCACTCAATGTCACAAGAGATGAGGTGTCCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGAACTGAGCTATTGGAGACTCTAGTAAAGATGGCTCCAACAAAAGAGGAAGAAATAAAACTTAAAAATTATGATGGTGACCTCTCAAAACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTATATAGAGCTAATTTTGAAACAGAAGTCAACTACCTTAGGAAGTCCTTTCAGACCCTGGAGGAAGCAAGTGAGGAATTAAGGAACAGCCGATTATTCCTCAAACTTCTTGAAGCTGTTTTAAGGACAGGAAACAGAATGAACGTTGGCACCAATCGTGGCGATGCCAAATCCTTCAAACTGGATACACTTCTAAAACTTGTAGATATAAAGGGCACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGGTACAGGTGGTGAATCTGCAAATGAGAATGTTCAAAAACAAACAACTTCCCAATTCAATGAGGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGATTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGATTCAGATGTCTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGTCTTGATAAAGTTAGATTGGTTTTGCAACATAAAAAGCCAGATATGCAAGGGAATTTCTTTAACTCAACAGGACTATTTCTGGATGATGCTGAAGAAAAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATGCAGCAAAGGAAGAAGCACACCCTTTCAGAATTTTTATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTTTGCAAAGAAGTAGGAAGGATGCAGGATAGAACAGTAATCGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCATTACCTGTTCTCAACAGGTACCATGCAAGACAAGATAGAAGTTCGGATGAGGAAAGCTTGTCTCCTTAG 2670 0.4798 MKPHHFTFFLILSLSLHIQVPTAKGLNTIQFHTPNESYTTRRILHQPLFPAASAPPPATPPPPPPDDIPSSPDIPFFNEYPVGPPPPVQNQPPAISTGVIANPTATQPTKPTKKVAIAISVVIVTLGMLSALCFFLYKHKAKHPVESQKLVGDGRNSRIVLEDSPRAPQPSSFLYIGTVEPTRTSVSEPNAANGSPYRKLNSIKLNSDHRYRPSPELQPLPPLNKPPDESHSPPAASSSSSSSSDEESRETAFHSPHGSSLSLEDNYYTPVSRQSYLANGSPAAAPAAMAPVVPYSKRTSPKSRFSAPSPDIRHVIVPSIKNAPAPSPPSPPPGSNKYQHVEKEVNSGPSRRLKFSSPPPAPNLTHLHSNGSTTLLKPPPPPPPPPPPPRKGWSPSISTSSSSVSKKEQTSWSASEGAASICSVSVRKGYSEEVEKRRDGDDVDGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSTSSAPKETVPRKSVLPPVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPLAFKRVEAMLYRANFETEVNYLRKSFQTLEEASEELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQKQTTSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVRLVLQHKKPDMQGNFFNSTGLFLDDAEEKIVRIKADERKALFLVKEVTEYFHGDAAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNRYHARQDRSSDEESLSP* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0064 889 MobiDBLite consensus disorder prediction 49 73 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 295 418 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 231 246 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 429 447 - -
Apr3g0064 889 PANTHER FORMIN-LIKE PROTEIN 9 889 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 394 418 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 215 229 - -
Apr3g0064 889 Pfam Formin Homology 2 Domain 445 838 IPR015425 -
Apr3g0064 889 SMART it6_source 440 853 IPR015425 -
Apr3g0064 889 MobiDBLite consensus disorder prediction 50 71 - -
Apr3g0064 889 MobiDBLite consensus disorder prediction 375 393 - -
Apr3g0064 889 Gene3D Formin, FH2 domain 446 861 IPR042201 -
Apr3g0064 889 MobiDBLite consensus disorder prediction 208 266 - -
Apr3g0064 889 PANTHER FORMIN-RELATED 9 889 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Apr3g0064 889 ProSiteProfiles Formin homology-2 (FH2) domain profile. 440 864 IPR015425 -
Apr3g0064 889 MobiDBLite consensus disorder prediction 428 447 - -
Apr3g0064 889 SUPERFAMILY Formin homology 2 domain (FH2 domain) 379 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0064 Apr-Chr3 1059917 1064252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0064 434 879 FH2 protein (formin) Gene Family AT5G67470 75.501 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0064 - - gmx:100803578 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0064 3 1059917 1064252 Apr3g0064 3 1059917 1064252 ECH
Apr7g0839 7 15386894 15391818 Apr3g0064 3 1059917 1064252 PCT