Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0058 ATGGATACCTTGTTTAGACTAGTGAATTTTCAACAACAGCAACAACAACAACAACCCGATCCATCCCTCAACTCCACCACGAGCCGAACATCAAGCAGCTCGAGATCCTCAAGACAAAACTATCATTACTATTCCCAACAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACCTATCCTCGTCTTCTTCTAAACACTATTACCATTACCAACCCCACCCCCATGTATCAACAACCTTTAACACAAACACAAGCACCCCCACCACCACCACCGATTACTCCTTCTCCCCCTCCCCACTCCCTGACTTCAACTTCAACTTCGATTTCTCCACCAACTGGTCACACAACGTCCTCCTCGAAACCGCGCGCGCCATCGCCGACAACAACAGCAACCGCGTCCACCACCTCCTCTGGATGCTCAACGAACTCAGTTCTCCCTTCGGCGACACCGACCAAAAACTCGCCGCGTATTTCTTCCAAGCCTTGTTCAGCCGCGTCACCGATGCAGGTGACCGAACCTACCGAACCTTAGCCTCGGCGTCGGACAAAACATGCTCCTTCGAATCCACAAGGAAGATGGTTCTCAAGTTCCAAGAAGTCAGCCCATGGACAACCTTCGGACACGTGGCGTCCAACGGAGCCATCTTAGAAGCCTTAGAAGGAAACTCAAAGTTGCACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTTCTCGAAGCATTAGCCACTCGAACCGACGAAACCCCACAACTTCGTCTGACCACCGTGGTTACCGGAAGACCCGGTAACTCCCTTCAACGTGTGATGAAGGAAATAGGGACAAGAATGGAAAAATTCGCCAGGCTCATGGGAGTGCCGTTTAAGTTTAACGTCGTTCATCACGCCGGTGACCTTTCGGAATTGAACTTGTCGCAACTTGACATCAAAGAGGACGAGGCGTTAGCCGTTAACTGCGTCAACGCTTTGCATTCCGTTTCTGCGGTTGGGAATAACCGTGACGTGTTGATATCGTCATTTCACGGGTTGCAACCGAGGATTGTGACGGTGGTGGAAGAGGAAGCTGATTTGGACGTGGGGTTCGAGGGTTACGAGTTCGTGAAAGGGTTTGAGGAGTGTTTGAGGTGGTTTAGGGTTTACTTTGAGGCGCTTGATGAGAGCTTTGCGAGGACGAGCAATGAGAGGTTGATGCTGGAACGTGCGGCGGGGAGGGCGATCGTGGACTTGGTGGCATGTTCACCGGCTGAATCAGTGGAGCGGCGGGAGACGGCGACGCGGTGGGGGATGAGGCTGCATGGGGGAGGGTTAAACGCCGTGCCGTTTAGCGAGGAGGTGTGTGATGACGTGAGGGCGCTGTTGAGAAGGTACAAGGATGGGTGGTCGATGGCACAGTGCTCCGACGCCGGAATATTCTTGTCGTGGAAGGAGCAACCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1482 0.525 MDTLFRLVNFQQQQQQQQPDPSLNSTTSRTSSSSRSSRQNYHYYSQQEDEECFNFYMDEEDLSSSSSKHYYHYQPHPHVSTTFNTNTSTPTTTTDYSFSPSPLPDFNFNFDFSTNWSHNVLLETARAIADNNSNRVHHLLWMLNELSSPFGDTDQKLAAYFFQALFSRVTDAGDRTYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEALEGNSKLHIVDISNTYCTQWPTLLEALATRTDETPQLRLTTVVTGRPGNSLQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSELNLSQLDIKEDEALAVNCVNALHSVSAVGNNRDVLISSFHGLQPRIVTVVEEEADLDVGFEGYEFVKGFEECLRWFRVYFEALDESFARTSNERLMLERAAGRAIVDLVACSPAESVERRETATRWGMRLHGGGLNAVPFSEEVCDDVRALLRRYKDGWSMAQCSDAGIFLSWKEQPVVWASAWRP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0058 493 Pfam GRAS domain family 119 492 IPR005202 -
Apr3g0058 493 PANTHER PROTEIN SHORT-ROOT 1 492 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Apr3g0058 493 MobiDBLite consensus disorder prediction 11 41 - -
Apr3g0058 493 ProSiteProfiles GRAS family profile. 108 492 IPR005202 -
Apr3g0058 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0058 Apr-Chr3 967327 969000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0058 1 493 GRAS Transcription Factor Family AT4G37650 58.801 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr3g0058 GRAS 4.1e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0058 - - gmx:100778524 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0058 3 967327 969000 Apr3g0058 3 967327 969000 ECH
Apr7g0826 7 15289079 15291389 Apr3g0058 3 967327 969000 PCT