Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0048 ATGTCTGTCGACCCTCAAAGCCACCAAACTCTTGACTTGTACTGCAGTGAAGCAACTAGCGATGTGATTCACTTGGATTCCGACGAGGCTTTGAATTTGAATTTGAATACTCTATCGGGTGATTCTGATTGTGATGAAAGCTGTCTATTGAGCTTATTAGAATCCGAACATGATCAGGTACAAGAACAAACAAAGTCACTAGGACAACTTCGGAATAAAACATGGTTGATTAATGCCAGACAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCATACTACAATTTCAGACCCGAGACAGCATATCTTTCTGTAAATTATCTCGATCGTTTCCTTTTGTCACACACCTTGATGCAAGACAAAGCGTGGCCTATTCAGCTGCTGTCCGTTGCTTGTCTTGCATTGGCAGCAAAAATGGAAGAAACAAAGGTGCCACTTCTTTTGGACCTTCAGGTGATCGAGTCCAGGTTCCTATTTAAGCCCAAAACGGTTCAGAGGATGGAGCTTTTGGTCATGGCCAGTCTCAAGTGGCGATTGCGCGCTGTAACCCCTTTTGATTTTGTCCATCTTTTCATTGCCAAGCTTGAATTCTCTGTTTCCACATTGGGAGATTTAAGTTATATAGTTTCTCGCGTCTCAGATGTTATCATCAGAACATGTCAAGTCATGGATTTCTTAGAGTTTTCACCGTCCACAATAGCAGCATCTGCATTGTTATGGGTGACCAATCAGTATGTTGATGACCAAAAATCATGCTGCTTCCACAAGAATATAAGCATTGAGATGGTGCAGAAATGTTACAACTTAATGAAGCAGAAGCAGATCATTCGCCGATTAGAACTTTTTGGGCCAAAGACTTCACATTTATTGCCCCTAAGTCCTACTTGTGTGCTTGATCATGCAGCTATGCAAGAAAGCCGCCATACTCACAAGCCATGA 939 0.4217 MSVDPQSHQTLDLYCSEATSDVIHLDSDEALNLNLNTLSGDSDCDESCLLSLLESEHDQVQEQTKSLGQLRNKTWLINARQEAINWILKVHAYYNFRPETAYLSVNYLDRFLLSHTLMQDKAWPIQLLSVACLALAAKMEETKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRAVTPFDFVHLFIAKLEFSVSTLGDLSYIVSRVSDVIIRTCQVMDFLEFSPSTIAASALLWVTNQYVDDQKSCCFHKNISIEMVQKCYNLMKQKQIIRRLELFGPKTSHLLPLSPTCVLDHAAMQESRHTHKP* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0048 312 Coils Coil 53 73 - -
Apr3g0048 312 SUPERFAMILY Cyclin-like 164 278 IPR036915 -
Apr3g0048 312 Gene3D - 62 180 - -
Apr3g0048 312 CDD CYCLIN 80 172 IPR013763 -
Apr3g0048 312 Gene3D - 52 267 - -
Apr3g0048 312 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 17 305 - -
Apr3g0048 312 PANTHER CYCLINS 17 305 IPR039361 -
Apr3g0048 312 SUPERFAMILY Cyclin-like 43 179 IPR036915 -
Apr3g0048 312 ProSitePatterns Cyclins signature. 80 111 IPR006671 -
Apr3g0048 312 Pfam Cyclin, N-terminal domain 53 179 IPR006671 -
Apr3g0048 312 Pfam Cyclin, C-terminal domain 182 272 IPR004367 -
Apr3g0048 312 SMART cyclin_7 85 173 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0048 Apr-Chr3 866772 868243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0048 11 275 Core Cell Cycle Gene Families AT1G70210 39.338 6.35e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0048 K18810 - gmx:100799323 460.299