Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0042 ATGCTCTCCACACTCCCTCCCTCCGATCTTCTTCTCGGAAACCCGTTCTCCGCCTTTTCCGGCGGTTTCACGCCGTGGGACTGCCACGACATCTTCTCCCCCGCCACCCCCATACCCGTCACCTCAAGCTCCGGTTCAGACGAACCAAACCAAACCCATGAAAAACCCAAACCTGACCCCGACGAACTGGACCGCCACGTGGCATCTGTCATGGACGAGCGAAAACGGCGTCGCATGATATCGAACCGGGAATCGGCCCGAAGGTCGCGGATGCGAAAACAAAGGCACCTAGAGAACCTACGGAACCAGTTGAACAAGTGTAGGATCGAAAACGGGGAACTCAATAACCGTTTACAGTTCGTTGTGCATCACTGTAACCGCGTTCGAACCGAAAACGAATGGCTCCGCTCCGAACGAACCCTTCTGCGCCAAAAAGTCTCCAATTTAACTCAAATTTTGGTTTTCCAACAATTGCAACCTTTCAACCCTCCATGGACATGCAATACTTCCGCCATCGTCACAGAATAA 528 0.5284 MLSTLPPSDLLLGNPFSAFSGGFTPWDCHDIFSPATPIPVTSSSGSDEPNQTHEKPKPDPDELDRHVASVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRIENGELNNRLQFVVHHCNRVRTENEWLRSERTLLRQKVSNLTQILVFQQLQPFNPPWTCNTSAIVTE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0042 175 MobiDBLite consensus disorder prediction 50 87 - -
Apr3g0042 175 PANTHER BZIP TRANSCRIPTION FACTOR 44 21 169 - -
Apr3g0042 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 135 IPR004827 GO:0003700|GO:0006355
Apr3g0042 175 PANTHER BZIP TRANSCRIPTION FACTOR 21 169 - -
Apr3g0042 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
Apr3g0042 175 CDD bZIP_plant_GBF1 75 126 IPR045314 GO:0003700|GO:0006355
Apr3g0042 175 MobiDBLite consensus disorder prediction 34 94 - -
Apr3g0042 175 Coils Coil 83 117 - -
Apr3g0042 175 SUPERFAMILY Leucine zipper domain 74 125 IPR046347 GO:0003700|GO:0006355
Apr3g0042 175 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
Apr3g0042 175 Pfam bZIP transcription factor 74 132 IPR004827 GO:0003700|GO:0006355
Apr3g0042 175 Gene3D - 72 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0042 Apr-Chr3 740065 740624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0042 1 168 bZIP Transcription Factor Family AT2G22850 37.668 3.35e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr3g0042 bZIP_1 5.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0042 - - ahf:112800711 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0809 7 15162889 15163450 Apr3g0042 3 740065 740624 PCT