Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0027 ATGCGACTGGTGCTATTGTGGCTGCTCTTCCTCTTCCTTCACAACAATGTATACTCAGCGCGCATCTCAGAATACCGCGCACTCTTCTCTTTCAAAGCATCATCAGTAACTGATGACCCAACCCACGCTCTCTCTTCATGGAACTCCTCCACCCCATTCTGCTCATGGTTCGGTGTCACGTGCGACTCACGCCGCCACGTCACCACCCTCTCCCTCCCCTCCCTCTCCCTGTCCGGTTCTCTCTCCGACGACCTCTCCCACCTCCCTTTCCTCTCCCATCTCTCACTCGCCGACAACAAGTTCTCCGGCCCCATCCCTCTTTCTCTCTCTTCTCTCTCAAATCTACGGTTCCTCAACCTGTCCAACAACGTCTTCAACGGAACCTTCCCTTCTCAACTCTCTCTGCTTACCAACCTCCAAGTCCTTGACCTCTACAACAACAACATGACCGGTCCTCTTCCCCTCTCCGTCACCAACATGCCCCTTCTTCGCCATTTGCATCTCGGCGGAAACTTCTTCTCCGGCGAGATCCCTCACGAGTACGGCACTTGGCTTCATCTCGAGTACCTCGCTCTGTCCGGCAACGAGCTCGCCGGGATCATTCCGCCGGAGATCGGAAGCCTTTCCTCACTCCGGGAGCTTTACATTGGGTACTACAACACTTACGACGGCGGCATCCCGCCGGAGATCGGAAACCTGTCGGAACTCGTTAGGTTCGACGCCGCATATTGTGGATTGTCCGGCGAGATTCCGGCGGAGCTGGGGAAGCTTCAGAAGTTGGATACCCTGTTTCTTCAGGTGAATGCGCTTTCCGGTTCCCTCACTCCTGAGCTTGGGAACCTCAAGAGCCTCAAGTCGATGGACTTGTCCAACAACATGCTTTCCGGCGAGGTTCCGGCGAGCTTTGCGGAGCTGAAGAACATGACGTTGTTGAACCTGTTCAGGAACAAGCTTCATGGCGCGATTCCTGAGTTCATCGGGGAGCTTCCGGCGCTGGAAGTGTTGCAGCTTTGGGAGAACAACTTCACTGGGAGCATTCCTCAGAGTTTGGGGAAGAACGGGCGGCTAACGCTCGTTGATCTTTCTTCGAACAAGTTAACTGGGTCTCTGCCCCCTGACATGTGTTCTGGGAACCGTCTTCAGACTCTGATAACTCTTGGGAATTACCTCTTTGGTCCCATTCCTGATTCGCTTGGAAAGTGCGAGTCTTTAAGTAGGATTCGCATGGGCGAGAACTTTCTGAATGGTTCTATTCCAAAGGGTCTTTTTGGGCTTCCGAAACTGACCCAAGTTGAGCTTCAGGATAATCTTCTCACGGGTCAGTTTCCTGAGGGTGGTTCCATGTCTGCCAATCTTGGTCAGATTAGTCTTTCCAACAACAAGCTTTCTGGGCCGTTGCCACCCACCATTGGGAACTTCACCAGCATGCAAAAGCTTCTCCTTGATGGCAACAAGTTCTCGGGTCGAATCCCTCCCGAGATTGGGAAGCTTCAACAGCTTTCCAAGATTGATTTTAGCCATAACAAGTTCTCGGGTCCTATTGCTCCTCAGATCAGTCAGTGCAAGCTCTTGACTTTCGTTGATCTCAGCCGTAATGAGCTTTCGGGTGTGATTCCAAACGAGATCACTGGTATGAGGATATTGAATTACTTGAACCTTTCCAGAAACCATTTAGTTGGTTCAATTCCAGGGTCTATAGCCTCTATGCAGAGTTTAACTTCTGTTGATTTTTCATACAACAATCTCTCTGGTTTGGTTCCCGGTACTGGCCAATTCAGCTACTTTAACTACACCTCTTTCTTGGGCAACCCTGAATTATGTGGACCTTATTTGGGTCCTTGCAAAGATGGGGTTGCCAATGGCCCTCGCCAGCCTCACGTTAAGGGTCCTCTTTCTTCTTCTTTGAAGCTCTTGCTGGTTATTGGGTTGCTTGTGTGTTCCATTGCGTTTGCTGTTGCAGCAATAATAAAGGCTCGGTCTTTGAAAAAGGCCAGTGAAGCTCGTGCTTGGAAATTAACTGCTTTCCAGCGTTTGGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATAATAGGGAAAGGCGGTGCAGGCATTGTTTACAAAGGGGGAATGCCCAATGGGGATCAAGTTGCAGTGAAAAGGTTACCAGCTATGAGCAGAGGATCTTCACATGATCATGGTTTCAATGCGGAGATTCAGACTTTGGGGAGGATTCGTCACAGACACATTGTTAGACTACTGGGTTTCTGTTCAAACCATGAGACAAATCTATTGGTCTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATTTGCATTGGGACACCAGGTATAAAATTGCTGTGGAGGCTGCTAAGGGCCTTTGCTATCTACACCATGACTGTTCACCACTCATTGTCCATAGAGATGTTAAGTCAAACAATATCCTCCTTGACTCCAATTTTGAAGCCCATGTTGCTGATTTTGGGCTTGCTAAGTTCCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCATATGGATACATAGCTCCAGAATATGCCTACACCCTCAAAGTTGATGAGAAAAGTGATGTATACAGCTTTGGGGTGGTTCTTTTGGAGCTTGTAACTGGAAGGAAACCGGTTGGAGAATTTGGTGATGGGGTGGACATTGTGCAATGGGTGAGGAAAATGACAGACTCAAACAAGGAGGGTGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCAGTTCCACTTCATGAGGTGATGCATGTTTTCTATGTAGCCATGCTGTGTGTTGAAGAACAGGCAGTGGAGAGACCAACTATGCGTGAAGTCGTTCAAATTCTGACAGAGCTTCCGAAGCCACCAAGCTCAAAACAAGGAGACATAACAATCACTGAATCATCTTTGTCATCATCAAACAGTTTAGAGTCTCCAACCACAGCATCTAAGGAACCTAAAGATAATCAACATCCTCCTCCGTCGCCACCTCCCGATCTTCTTAGCATTTGA 3045 0.4857 MRLVLLWLLFLFLHNNVYSARISEYRALFSFKASSVTDDPTHALSSWNSSTPFCSWFGVTCDSRRHVTTLSLPSLSLSGSLSDDLSHLPFLSHLSLADNKFSGPIPLSLSSLSNLRFLNLSNNVFNGTFPSQLSLLTNLQVLDLYNNNMTGPLPLSVTNMPLLRHLHLGGNFFSGEIPHEYGTWLHLEYLALSGNELAGIIPPEIGSLSSLRELYIGYYNTYDGGIPPEIGNLSELVRFDAAYCGLSGEIPAELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLSGEVPASFAELKNMTLLNLFRNKLHGAIPEFIGELPALEVLQLWENNFTGSIPQSLGKNGRLTLVDLSSNKLTGSLPPDMCSGNRLQTLITLGNYLFGPIPDSLGKCESLSRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLLTGQFPEGGSMSANLGQISLSNNKLSGPLPPTIGNFTSMQKLLLDGNKFSGRIPPEIGKLQQLSKIDFSHNKFSGPIAPQISQCKLLTFVDLSRNELSGVIPNEITGMRILNYLNLSRNHLVGSIPGSIASMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGGMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQGDITITESSLSSSNSLESPTTASKEPKDNQHPPPSPPPDLLSI* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0027 1014 SUPERFAMILY L domain-like 355 614 - -
Apr3g0027 1014 Pfam Leucine rich repeat 524 582 IPR001611 GO:0005515
Apr3g0027 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Apr3g0027 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 980 - -
Apr3g0027 1014 SMART LRR_typ_2 281 304 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 329 353 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 112 131 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 354 377 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 569 592 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 473 497 IPR003591 -
Apr3g0027 1014 SMART LRR_typ_2 136 160 IPR003591 -
Apr3g0027 1014 Gene3D Ribonuclease Inhibitor 342 618 IPR032675 -
Apr3g0027 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 1001 - -
Apr3g0027 1014 Gene3D Ribonuclease Inhibitor 186 341 IPR032675 -
Apr3g0027 1014 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Apr3g0027 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Apr3g0027 1014 SMART serkin_6 689 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr3g0027 1014 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Apr3g0027 1014 MobiDBLite consensus disorder prediction 964 1014 - -
Apr3g0027 1014 Gene3D Ribonuclease Inhibitor 22 184 IPR032675 -
Apr3g0027 1014 SUPERFAMILY RNI-like 70 391 - -
Apr3g0027 1014 MobiDBLite consensus disorder prediction 964 999 - -
Apr3g0027 1014 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Apr3g0027 1014 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 1001 - -
Apr3g0027 1014 MobiDBLite consensus disorder prediction 1000 1014 - -
Apr3g0027 1014 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0027 Apr-Chr3 489883 493661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0027 14 990 Receptor kinase-like Gene Family AT5G65700 81.994 0.0 1611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr3g0027 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0027 - - gmx:100499646 1779.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0794 7 14927017 14931237 Apr3g0027 3 489883 493661 PCT