Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0018 ATGGCCGCAGGGATTGGCCTTCTCTCCATGACCCAGATCCAAAATTTGTCACAATCCCAACACCATCAAAATCAACCAAACCCTAACTCCACTAGTCCCACCGGCATGTGGAATCCAAGGGAACAAAATCAAGATCAAGAAGATGACTCTTGGGAAGTAAGAGCCTTTGCAGAAGACACAAGAAACATCATGGCCACCACTTGGCCCCCAAGGTCTTACTCCTGCACCTTCTGTAGAAGAGAGTTTCGCTCTGCTCAAGCTCTTGGTGGCCACATGAACGTTCATCGCCGTGACCGTGCTCGCCTCCACCACCACCACAGCCACCACCATCACCAAGCTTCACCCAACAACCCCACTTCTTCTCTCTCTCAAGACCTTGTTGCAAATGCTGGGTTGTGCCTCCTCTACCACTTGCCAAGCCCTAATAGTGGTGCTCCTTTCTCCACTCTTGGCCACAGAACTGGCTTCAATAATGCATGCGGTGAATCACCCTCCCCTCTTCTCTCCGTCTCTTCTTACCCTCCAAATAACTTGATGATGGTGGTGCCAACTTGTTCTCCTAATTCCTTTGACTTCCCTGTGGCTCGTGCTTCAGGGATCAATGGGTTTTCCTCGTATTCCCTCAGCTCTAGCAAAGTGGAAGAACAACAACCCACAACCTCTTCCACCAACCACGAGGAGCTTGATCTAGAGCTACGCTTGGGAAGTAGATCAACACCAACATGA 726 0.5028 MAAGIGLLSMTQIQNLSQSQHHQNQPNPNSTSPTGMWNPREQNQDQEDDSWEVRAFAEDTRNIMATTWPPRSYSCTFCRREFRSAQALGGHMNVHRRDRARLHHHHSHHHHQASPNNPTSSLSQDLVANAGLCLLYHLPSPNSGAPFSTLGHRTGFNNACGESPSPLLSVSSYPPNNLMMVVPTCSPNSFDFPVARASGINGFSSYSLSSSKVEEQQPTTSSTNHEELDLELRLGSRSTPT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0018 241 MobiDBLite consensus disorder prediction 15 49 - -
Apr3g0018 241 MobiDBLite consensus disorder prediction 209 241 - -
Apr3g0018 241 MobiDBLite consensus disorder prediction 209 225 - -
Apr3g0018 241 PANTHER OS07G0101800 PROTEIN 36 238 - -
Apr3g0018 241 PANTHER ZINC FINGER C2H2-TYPE/INTEGRASE DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 36 238 - -
Apr3g0018 241 ProSiteProfiles Zinc finger C2H2 type domain profile. 73 100 IPR013087 -
Apr3g0018 241 SUPERFAMILY beta-beta-alpha zinc fingers 70 100 IPR036236 -
Apr3g0018 241 MobiDBLite consensus disorder prediction 15 41 - -
Apr3g0018 241 MobiDBLite consensus disorder prediction 101 123 - -
Apr3g0018 241 Gene3D Classic Zinc Finger 65 130 - -
Apr3g0018 241 ProSitePatterns Zinc finger C2H2 type domain signature. 75 95 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0018 Apr-Chr3 293929 294654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0018 36 106 C2H2 Transcription Factor Family AT4G17810 68.493 1.04e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0018 - - vra:106767773 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0018 3 293929 294654 Apr3g0018 3 293929 294654 ECH
Apr7g0788 7 14839096 14839830 Apr3g0018 3 293929 294654 PCT