Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0014 ATGGAAGGCGTTGCAAAGCTCTTCTGGGTGTTCGCGATCTGCATGTTGGTAATGGCACAGCTGATAACAGCCGCAGAAGAAAGCAGAGGAAAGGAGCTTATTAATAAGGTATGCGAAAAATCCGAAATAAAGGACCTTTGCATTGAAGTCCTTTCATCGGACCCTGTTAGAAGCCCAAACGCAAACCTTAAAGACTTGGCAATCGTATCTCTTAAAGTCGCTGCCAATAACGCTTCTAGCATTCTCTCCGACGCTAAAATGCTCATCGACGATGACAACTTGGACCCAGATGTTCAACAAGGCTTGGCTGATTGCAAGGAAAACATCTTGGACGCTGGGAGTCAACTCGAAGACAGCATTGCTGCATTGTTGGTGGGATCCCATGCTGATGCTAAGGTTTGGCTCAAAGCTGCTTTGGCTGCTATAACTACCTGCGACGATTCCATCCCAGGAGATGATGATATTCTTTCCGTTAAGAGTCATGTCTTCCGCAAATTGTGCAACATTGCCGTCGAAATCAACAGCTTAATGGCAAAGTCCTCCTAA 546 0.4597 MEGVAKLFWVFAICMLVMAQLITAAEESRGKELINKVCEKSEIKDLCIEVLSSDPVRSPNANLKDLAIVSLKVAANNASSILSDAKMLIDDDNLDPDVQQGLADCKENILDAGSQLEDSIAALLVGSHADAKVWLKAALAAITTCDDSIPGDDDILSVKSHVFRKLCNIAVEINSLMAKSS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0014 181 CDD PMEI-like_1 33 177 - -
Apr3g0014 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 175 IPR006501 GO:0004857
Apr3g0014 181 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 1 170 - -
Apr3g0014 181 PANTHER PECTINESTERASE 1 170 - -
Apr3g0014 181 Pfam Plant invertase/pectin methylesterase inhibitor 33 172 IPR006501 GO:0004857
Apr3g0014 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 177 IPR035513 -
Apr3g0014 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 177 IPR035513 -
Apr3g0014 181 SMART PMEI_2 29 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr3g0014 Apr-Chr3 194269 194814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0014 10 178 Carbohydrate Esterase AT3G49220 26.087 1.01e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0014 - - gmx:100785595 238.81