Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr3g0009 ATGGCTGCCACATCCGGGATGTCTGATCAGGAAACACTAGTGTTTTCCAGAGAAAGTGTTCATCCCAGGTTGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTTCTAAATTCCTTGCTGAAATCATCGTATGCTGAGGCTTTCAATGGTCAGAAGGATGTGCAGAAGGGTGTAGAAATTGGGAGGATGTGGGAAAATCTCATTCTACAAATATGTGATGATTATTTCTTCTATGAACAAATTGAAAATTACAATAAGCCATTTCTTAATGCAGTAGCCCAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAAACAAGATGAATTAGGTCCGCCACATGATGATGCCAACAGAAGAAAACTTTCATATAGGCATCGGGTCATTGCCCATAAGTACTTACAGGGTTTACGGAACATTTTAAATCATGATACAATAAAACTCTGGGATGAATTGTATGATAAAACTGACGAATACACTGACAGATGGCTTTCATCAGCACGGACCTTTTTGAAGGAGTGCTCAGGTGAAGATAAAGATGCAGTTTCTTCTATTGCTTTTGATAACACAAGCACTAACTCAACTAATGCAAACTATCAGCACGTAAATGTATTGGTGACATCAGGATCGTTAATTCCCTCTCTTGTGAAGTGCATGCTCTTTCATCTGGACAGCTTAATACCGCATGGAAATGTTTATAGCTCATGGGAAGTGGGGAAAATTCAATGTTTCCGATGGATCAAAGAGCGTTTCAACCATCCCAATGTTCGTTTTTGTGTAATTGGAGATGGATGGGAAGAGTGTGAAGCTGCGGAAATCATGAAATGGCCGTTTATTAAGATTGATCCACGGCCAGGCAAACCTCACAGGTTCCCTGGTCTCACTTTGACAACAGTTAGCCACTATTTTTCTGTGGTGTATGGAAGGCCCAACAATGAGAATGATGAAGAGTGA 963 0.4071 MAATSGMSDQETLVFSRESVHPRLDVYVWDMDETLILLNSLLKSSYAEAFNGQKDVQKGVEIGRMWENLILQICDDYFFYEQIENYNKPFLNAVAQYDDGRDLSDYDFKQDELGPPHDDANRRKLSYRHRVIAHKYLQGLRNILNHDTIKLWDELYDKTDEYTDRWLSSARTFLKECSGEDKDAVSSIAFDNTSTNSTNANYQHVNVLVTSGSLIPSLVKCMLFHLDSLIPHGNVYSSWEVGKIQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMKWPFIKIDPRPGKPHRFPGLTLTTVSHYFSVVYGRPNNENDEE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr3g0009 320 SFLD Haloacid Dehalogenase 25 285 - -
Apr3g0009 320 SUPERFAMILY HAD-like 24 293 IPR036412 -
Apr3g0009 320 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 25 285 - -
Apr3g0009 320 TIGRFAM EYA-cons_domain: EYA conserved domain 25 302 IPR006545 GO:0007275
Apr3g0009 320 PANTHER EYES ABSENT 18 311 IPR028472 GO:0004725
Apr3g0009 320 Gene3D - 25 290 IPR038102 -
Apr3g0009 320 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 18 311 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr3g0009 24 320 Protein tyrosine phosphatase (PTP) family AT2G35320 59.259 9.36e-137 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr3g0009 - - gmx:100791661 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0009 3 142717 146184 Apr3g0009 3 142717 146184 ECH