Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0235 ATGAAACTACAAGCACATATTCCGGGGCAGATGTCAGGACAGGTACCAAATCAAGCAGGGTCTCAATTGCCTGGACTGACCCAACTAAATGGGAATGCGCTCCCTCATCAAATGCCACCTTTAGGTGGTGTACCGCGTGCAACAATTAATATGGACCCAGAATTTCTTAGAGCACGCTCATTTATTGAAGAGAAGATCTATGATATGTTATTGCAACGACAACAGCCAGCAGCTACAGAAGTAGTTAGAAGGAAGCTTAAGGATCTTGCAAAACGCTTGGAGGGGGGCATGTTAAAAGCTGCTCGCTCGAAGGAGGATTACATGAACTTGGATACACTAGAGAGTCGTTTATCGAATTTCCTCAGACGAGCACCTATGAATAATCATAACCAACAATATCCACAGCCTGTTAGCTCCTCTCCAATTGGTACAATGATACCAACCCCTGGTATGTCACATGTTCCCAATTCAAGCATGGTGGTTGCATCTTCTATGGATGCCTCAATGATTTCTTCCCGCGGATGTAATAACATAGTATCAACTTCTTTCAATAGTGTAAACATGTTACCAGCTGGTGACATGCTTGACAGTTCCTTAAATAGATTTGATGGCTTGTCTAATGGTTATCAGCAGTCTTCTGCCAGCTTTTCTGTTGCTTCAGGGGGGAACATATCATCAGTAGGGGCACAGAGAATTGCTAGCCAGATGATCCCCACTCCTGGATTTACTGCCAGCAGTAATCATTCACACATGAATATAGATTCTTCCACTAATGGTGGTGCCTTTTCTAGTGTAGAGTCTACTATGGTACCACAGTCACAGATGCAGCAGCAGAAGCTGCATGTTAGTGGCCCAAATAATCATGTGTTGCAGAACCTCAGCAGCCAAATGGGTAGTGGAATGCGACCTGCTTTACGACACAAGCCATTTGCAAACTCAAATGGTGCTGTAAACAATGGGCCAGGCTTGATTGGAAACAATATACCGCTTGCAAATGAACCTGGCACTTCTGACAGCTTTGCTTCAACTTATGCTACTTCCCCTATGCACTTGCAACAGCACTTCGATCAAAATCAGAAACCAGTAGTGCAGGGTGATGGATATGGATTGAATAATGTCGACACTTTTGCTTCTGGAAACTTTTATGCATCTGCACCAGGCTCTGGTTCTGTAGGGAACACTCAGAACAGTAATTCAGTAAAATTATCATCAATACCCAAAACTAGCTCAATGATAAGTGGTCAGTCAAATTTCCATGGTATGCAGCAGGCAGCTCATATAAAGTCTCAAGCAATTAATCAGTTTGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGATGGCTTTATGCATTCTCAACAGCAATATCAGCACAGGCCACAACAATTTCAACAGCCAGATCAGTATGTGCAGCAGCAATTTCAATCAATGCAAAGTCAACAGCCTCAGCATGTGGTCAACACTGATGCTTTCAGTCAATCTCAGCTGTCTTCTTCCAATCTGGAAAACCGAGTGAAGTCTGAGCCTGGAATTGAGCACCATAAAGAAGTGATCAATTCTCAGGTCTCTGAACAGTTCCAAATGTCTGAGATGCAGAATCAGTTCCAGCAGAACCCTTCAGAAGATTGCTCTAGGGGTGCTCAACATCTTTCATTCCCATCTGGTCACCAAGATTTATCATCATCAGCGCCTCAAAATTCACAACAAATGTTGCACCCACATCAATTGATTTCAGAGTCTCAAAATAATTTTAGCTGTCTTACAGTTGGGGCACAAACCAAATCAGTAGTTTTAAACCAATGGCCTCAATCACAAGATGGTAACCACACAGCTGACAATATTTCACATGACCAGCATCTCCACATGGATTTTCATCAAAGAATATCTGGACAAGATATAGCACAGTGCAATAATTTATCATCAAATGGATCTATTATTGGTCAAGCTGTGGCTTCTGGAGGCTCAGCTGAGCTGCTGGACTCAGGAAGTGCTATAAAAAAGGCTCACAGGAATCAACAAAGGTGGCTTTTATTTCTACTTCATGCCCGACGATGTTCTGCCCCCGAAGGACTATGCAAAGAACGCTTTTGTTCTATTGCACAAAAGTTATGTAAGCACATAGATGGATGCACTCTGCGCCATTGTCCATATCCTCGCTGTCATCATACTAGGGTGTTGCTTCATCATTTCATAAACTGCAAAGATCCATGTTGTCCTGTTTGTGTTTTTGTAAGAAATTATCGACGTGCATTTCAGCTCAAAACTCAGATTCGGCCAGAACCTGAATCAAACTTGCCTACTACAGTGAATGGATCCTGTAAATCTTACAATATTGTAGGCACATCACCTAGATTGATCTCAAAGCCTCCATTAGTTGTTGAAATTTCAGAAGACTTGCACCCATCTCCAAAACGAATAAAGATTGAGCATCGCTCCCAGTCCATTAATCCTGAAAATGACCATTCTGCGTCATCTTTTTCTGCAAATTGTGAATCTGTTGTATCCAGGGAGGCTCAGTCCCAACCCTATCCCAATGCTGATAAGTCTTCCTTGGTAAAATCTGAGCTTACAGAGGTTAAGGATGAAGTTCCAACACATGTGGTACATGAAAAGCTTACTAAGATGAAAATGGATAACAATAATGCAGAGGATAAAATGCATGGTGGTGAACCTGTCAAATATGATGAACCTGCTAATTTAGCTAGGCCAGATAATATCAAAACTGAGAAAGAAACTGGACAAGACAGGCAAGAAAATGTTGTGCAGCCATCTGAAAATCCAGCTGGAACCAAGTCAGGTAAACCAAAAATAAAGGGAGTCTCACTAACAGAATTATTTACCCCGGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAATGGGTTGGCCAAAGTAAGTCAAAAGCTGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAATTGTGTGCTGTAGAGAAGCTTACTTTTGAACCACCGCCTATTTATTGCACAACTTGTGGGGTTCGCATTAAACGAAATAATATGTATTATACCACGGGTACTGGAGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGTACAGAGAACATCATTGTTGATGGGACTCCTATTGCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGCGATAAATGTGAAGCATGGCAACATCAAATTTGTGCTTTATTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATATACTTGCCCTAATTGCTATATTCAGGAGGTAGAAAGAGGAGAGCGCAAGCCTTTACCCCAAAGTGCTGTTCTTGGGGCCAAGGATTTGCCAAGAACTATTCTTAGTGATCACATAGAACAGCGGTTATTTAGACGTTTAAAGCAAGAAAGACAAGAGAGGGCAAGGCTTCAAGGGAAAAGTTATGATGAGGTTCCAGGAGCAGAAGCTCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAAAAGTTAGAAGTGAAACCACGGTTTTTGGAGATTTTTCAGGAAGAGAATTACCCAACAGAATTTCCTTATAAATCGAAGGTAATTTTGTTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTTCCCAATCAGCGCCGGGTATACCTTTCATATTTGGACTCTGTGAAGTATTTTAGGCCTGAGGTTAAAGCAGTGACGGGAGAGGCTCTTCGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTCACAAGCTGCTATATATGGGCATGTCCCCCATTAAAGGGTGAAGATTATATTTTATATTGTCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTACGGGAATGGTATCTATCCATGTTAAGAAAAGCTTCCAAGGAGAATATTGTGGTTGATCTCACCAACTTGTACGATCATTTCTTTGTGTATACTGGACCAGAATGTAGAGCTAAGGTTACAGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGTGCTGCAGAGGATTTGATATATCAGCTTCGTCAAGAGGAAGATGGAAGAAAACAAAATAAAAAGGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTGAAAGCATCCGGTCAGTCAGATCTTTCAGGAAATGCCTCAAAAGATCTGCTCCTTATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGCACTAGCTGTTGTATTCTAATGGTGTCTGGAAACCGTTGGGTTTGCAATCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACTCAAACGAGAAGAGAGAGAAAGGCATCCTATTAATCAGAGGGAGATACATACTCTTTATCAGGTTGAAATTACTGATGTGCCATCTGATACGAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAAGCATTTTTGAGTCTCTGCCAGGGGAATCATTACCAATATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTTCTATATCATCTTCATAATCCAACAGCTCCTGCGTTTGTTACAACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGCTGTGAAGTTTGCCCTGAGTATGATGTGTGCAATGCTTGTTATCAAAAGGAAGGAAGTGTTGATCATCCTCATAAGTTGACAAATCATCCATCAATGGTAGATCGTGATGCTCAAAATAAAGAAGCAAGGCAACTTCGAGTATTGCAGCTACGGAAAATGCTCGATCTCCTTGTACATGCATCCCAATGTCGTTCCGCACATTGCCAATATCCAAATTGTCGCAAGGTGAAGGGGCTTTTCCGTCATGGGATGCACTGCAAAACTCGTGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTACAACTTCATGCTCGTGCTTGCAAAGAATCTGAATGCCATGTGCCACGATGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAACAGTCTGATTCGCGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCTGGATGA 5205 0.4136 MKLQAHIPGQMSGQVPNQAGSQLPGLTQLNGNALPHQMPPLGGVPRATINMDPEFLRARSFIEEKIYDMLLQRQQPAATEVVRRKLKDLAKRLEGGMLKAARSKEDYMNLDTLESRLSNFLRRAPMNNHNQQYPQPVSSSPIGTMIPTPGMSHVPNSSMVVASSMDASMISSRGCNNIVSTSFNSVNMLPAGDMLDSSLNRFDGLSNGYQQSSASFSVASGGNISSVGAQRIASQMIPTPGFTASSNHSHMNIDSSTNGGAFSSVESTMVPQSQMQQQKLHVSGPNNHVLQNLSSQMGSGMRPALRHKPFANSNGAVNNGPGLIGNNIPLANEPGTSDSFASTYATSPMHLQQHFDQNQKPVVQGDGYGLNNVDTFASGNFYASAPGSGSVGNTQNSNSVKLSSIPKTSSMISGQSNFHGMQQAAHIKSQAINQFEKLNFQSSLTSRDGFMHSQQQYQHRPQQFQQPDQYVQQQFQSMQSQQPQHVVNTDAFSQSQLSSSNLENRVKSEPGIEHHKEVINSQVSEQFQMSEMQNQFQQNPSEDCSRGAQHLSFPSGHQDLSSSAPQNSQQMLHPHQLISESQNNFSCLTVGAQTKSVVLNQWPQSQDGNHTADNISHDQHLHMDFHQRISGQDIAQCNNLSSNGSIIGQAVASGGSAELLDSGSAIKKAHRNQQRWLLFLLHARRCSAPEGLCKERFCSIAQKLCKHIDGCTLRHCPYPRCHHTRVLLHHFINCKDPCCPVCVFVRNYRRAFQLKTQIRPEPESNLPTTVNGSCKSYNIVGTSPRLISKPPLVVEISEDLHPSPKRIKIEHRSQSINPENDHSASSFSANCESVVSREAQSQPYPNADKSSLVKSELTEVKDEVPTHVVHEKLTKMKMDNNNAEDKMHGGEPVKYDEPANLARPDNIKTEKETGQDRQENVVQPSENPAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGTGDTRHYFCIPCYNDARTENIIVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKPRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKASKENIVVDLTNLYDHFFVYTGPECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACTSCCILMVSGNRWVCNQCKNFQICDKCYEAELKREERERHPINQREIHTLYQVEITDVPSDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKEGSVDHPHKLTNHPSMVDRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0235 1734 SUPERFAMILY RING/U-box 1416 1489 - -
Apr351g0235 1734 ProSitePatterns Zinc finger PHD-type signature. 1028 1099 IPR019786 -
Apr351g0235 1734 Gene3D - 1432 1488 IPR043145 -
Apr351g0235 1734 SMART zz_5 1435 1479 IPR000433 GO:0008270
Apr351g0235 1734 SMART zz_5 1555 1601 IPR000433 GO:0008270
Apr351g0235 1734 MobiDBLite consensus disorder prediction 245 302 - -
Apr351g0235 1734 ProSitePatterns Zinc finger ZZ-type signature. 1561 1588 IPR000433 GO:0008270
Apr351g0235 1734 ProSiteProfiles Zinc finger ZZ-type profile. 1436 1499 IPR000433 GO:0008270
Apr351g0235 1734 MobiDBLite consensus disorder prediction 815 858 - -
Apr351g0235 1734 SMART KAT11_2 1150 1448 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr351g0235 1734 Pfam TAZ zinc finger 1626 1696 IPR000197 -
Apr351g0235 1734 Pfam TAZ zinc finger 674 742 IPR000197 -
Apr351g0235 1734 SMART TAZ_2 667 745 IPR000197 -
Apr351g0235 1734 SMART TAZ_2 1619 1697 IPR000197 -
Apr351g0235 1734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1052 1100 IPR013083 -
Apr351g0235 1734 Coils Coil 1133 1153 - -
Apr351g0235 1734 MobiDBLite consensus disorder prediction 245 299 - -
Apr351g0235 1734 MobiDBLite consensus disorder prediction 901 917 - -
Apr351g0235 1734 Pfam PHD-finger 1058 1100 IPR019787 -
Apr351g0235 1734 Gene3D - 1555 1609 IPR043145 -
Apr351g0235 1734 MobiDBLite consensus disorder prediction 875 937 - -
Apr351g0235 1734 PANTHER CBP/P300-RELATED 127 1732 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr351g0235 1734 CDD PHD_HAC_like 1027 1099 - -
Apr351g0235 1734 Gene3D TAZ domain 1613 1730 IPR035898 -
Apr351g0235 1734 MobiDBLite consensus disorder prediction 875 893 - -
Apr351g0235 1734 MobiDBLite consensus disorder prediction 538 569 - -
Apr351g0235 1734 ProSiteProfiles Zinc finger TAZ-type profile. 664 745 IPR000197 -
Apr351g0235 1734 SUPERFAMILY FYVE/PHD zinc finger 1061 1101 IPR011011 -
Apr351g0235 1734 Pfam Zinc finger, ZZ type 1558 1600 IPR000433 GO:0008270
Apr351g0235 1734 PANTHER HISTONE ACETYLTRANSFERASE HAC12 127 1732 - -
Apr351g0235 1734 Gene3D TAZ domain 662 750 IPR035898 -
Apr351g0235 1734 ProSiteProfiles Zinc finger ZZ-type profile. 1556 1609 IPR000433 GO:0008270
Apr351g0235 1734 MobiDBLite consensus disorder prediction 818 853 - -
Apr351g0235 1734 ProSiteProfiles Zinc finger TAZ-type profile. 1616 1699 IPR000197 -
Apr351g0235 1734 Pfam Histone acetylation protein 1157 1377 IPR013178 GO:0004402|GO:0006355|GO:0016573
Apr351g0235 1734 SUPERFAMILY TAZ domain 1618 1701 IPR035898 -
Apr351g0235 1734 SUPERFAMILY RING/U-box 1537 1605 - -
Apr351g0235 1734 SUPERFAMILY TAZ domain 669 749 IPR035898 -
Apr351g0235 1734 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1117 1554 IPR031162 GO:0004402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Apr351g0235 HAT_KAT11 1.8e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0235 K04498 - gmx:100809207 3085.05