LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr351g0229	ATGCACCACAACCTTAAGCTTGCAAGGTTGTGGATTGCTTTGCTTGCAGTCTCAACCACCGCAGTTCATTGCAAAACTGCCTCCCAGGATGTTTCAGCCCTTAATGCGATGTATAGCAGCTTAAATTCCCCTTCACAACTCAGTGGCTGGAAATCAAGCGGAGGTGATCCTTGTGGCAATTCCTGGGAACGAATCAAATGCTCAGGCTCTTCTGTCACGGAAATAAATTTATCTGACCTTGGACTTACTGGATCAATGAGCTACCAGTTGTCTAGCTTAACATCAGTTACCTATTTTGATTTGAGCAACAACAACCTCAAGGGTGAGATACCGTATCAACTTCCTCCAAATGCTCGTTACATAGATCTTTCTAAGAATGGCTTCACTGGAGGCGTACCTTATTCCATTTCTCAGATCAGTGACCTCGACTACCTAAATATTGCTCATAATCAACTCAATAACCAGTTGGGTGATATGTTTGGGAACCTCGGTAAACTCCAACAGCTGGATTTATCATTTAATTCGCTATCAGGGAACCTACCTGATAGTCTCAAATCGCTCAGAAACCTCAAGAAGTTGCACCTACAAAACAATCAATTCACGGGTTCAGTAAATGTCCTTGCCAACCTCCCACTTGAAGATTTGAATGTTGAAAACAACAAATTTACTGGTTGGTTCCCTGAGGAGTTAAAGGATATAAAGAGATTGCATACTGGAGGAAACTCTTGGTCAAGCGGACCAGCACCTCCTCCTCCTCCTGGTACACCCCCTATCAAGCATCATTCCGACGAGAAAAACAATAAAAAACCTGTTGTCAGGGAATTAGCCATAGCAGGCGCAGCTTTTGGCCTACTAGCAATAATTATAGTTGCCGTTGCTCTTTCTAAAAGAAAGTCATCATCACCTTCTTCACATTTTACCGATGAAGAGAAGCATAGCCAGCATAAATCTTTTGCGACCCTTTCATCTCAGGAGTTATCAAAAGATTCCAACACCAGTGTCAGCAAAGAATACAAAGGATTTAAATCATTGGATTCCACTTCAATTGACATAAAGGCTTTGCAAAAAACTCCATCAGTTAGTGTTAGGTCATCAGTCTCTGATTGTGTGCAATCGTTTAACGACAACAAGTTTGCAAATCGTCTAAAAGTAAGAAGAAGCACATCAATCCGTGTTAGTCCTTTTTCATTTGAAGAGCTGAAGACTGCTACTGCAAATTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATTGGACGTGTTTATCGGGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAAATCGACCCTTCACTTTTCCATGATGGTTCTCCTGAGGAATTCTCTCAGATTGTTTCAATTATCGGCAAAATTCACCACCAAAATATTGTTGAGCTTGTTGGTTATTGCTCTGAACGGGAGCACTTGCTAGTATATGATTATTACAGAAATGGCTCTCTTCATGACTTTTTACATTTGTCAGATGACTTCAGCAAACCTCTAACTTGGAACACACGAATCAGAATTGCATTGGGAACAGCTCGGGCTGTTGAGTACCTACATGAAATTTGTTCTCCTTCATTGTTACACAAGAATATCAAGTCCTCCAATATTTTGCTTGACACAGATCTGAATCCCCGTCTCGCAGACTATGGTTTGGCATCATTCCACCAGCGGACGAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACACAACCATCTGCGTATACGCTGAAGAGTGATGTATACAGTTTTGGGGTAGTGATGCTGGAACTTTTGACAGGTCGAATGCCATTAGACAGTTCAAAACCAAAAGCAGAACGGTGTCTGGTTCGTTGGGCCACCCCACAGCTTCGGGACATTAATGCAGTGGAAAATATTGTGGACCCTGCCCTCCGGGGACTTTACCCACCCAAGTCACTGTTCCGATTTGCTGATATCATCGCCCTCTCTGTCCAGTCTGAGCCCGAATTTCGGCCAGCTGTGTCAAAGGTAGTTCAGGCCTTGGAGCGATTGATTCAAAGTTCCAGTATGACACTCAGAGAGGATCTTGGTCGGATGGATGATGATTATGATGATGATGATCCATCCACTCTTTGA	2115	0.4284	MHHNLKLARLWIALLAVSTTAVHCKTASQDVSALNAMYSSLNSPSQLSGWKSSGGDPCGNSWERIKCSGSSVTEINLSDLGLTGSMSYQLSSLTSVTYFDLSNNNLKGEIPYQLPPNARYIDLSKNGFTGGVPYSISQISDLDYLNIAHNQLNNQLGDMFGNLGKLQQLDLSFNSLSGNLPDSLKSLRNLKKLHLQNNQFTGSVNVLANLPLEDLNVENNKFTGWFPEELKDIKRLHTGGNSWSSGPAPPPPPGTPPIKHHSDEKNNKKPVVRELAIAGAAFGLLAIIIVAVALSKRKSSSPSSHFTDEEKHSQHKSFATLSSQELSKDSNTSVSKEYKGFKSLDSTSIDIKALQKTPSVSVRSSVSDCVQSFNDNKFANRLKVRRSTSIRVSPFSFEELKTATANFASGRLLGEGSIGRVYRAKYADGKVLAVKKIDPSLFHDGSPEEFSQIVSIIGKIHHQNIVELVGYCSEREHLLVYDYYRNGSLHDFLHLSDDFSKPLTWNTRIRIALGTARAVEYLHEICSPSLLHKNIKSSNILLDTDLNPRLADYGLASFHQRTSQNLGAGYNAPECTQPSAYTLKSDVYSFGVVMLELLTGRMPLDSSKPKAERCLVRWATPQLRDINAVENIVDPALRGLYPPKSLFRFADIIALSVQSEPEFRPAVSKVVQALERLIQSSSMTLREDLGRMDDDYDDDDPSTL*	705

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr351g0229	704	MobiDBLite	consensus disorder prediction	299	326	-	-
	Apr351g0229	704	PANTHER	OS01G0253100 PROTEIN	18	691	IPR045271	GO:0004714\|GO:0006468
	Apr351g0229	704	Pfam	Leucine rich repeat N-terminal domain	28	68	IPR013210	-
	Apr351g0229	704	Pfam	Protein tyrosine and serine/threonine kinase	410	674	IPR001245	GO:0004672\|GO:0006468
	Apr351g0229	704	SUPERFAMILY	Protein kinase-like (PK-like)	387	675	IPR011009	-
	Apr351g0229	704	SUPERFAMILY	L domain-like	26	247	-	-
	Apr351g0229	704	Gene3D	Phosphorylase Kinase; domain 1	366	483	-	-
	Apr351g0229	704	MobiDBLite	consensus disorder prediction	237	266	-	-
	Apr351g0229	704	Pfam	Leucine rich repeat	116	176	IPR001611	GO:0005515
	Apr351g0229	704	Gene3D	Transferase(Phosphotransferase) domain 1	484	699	-	-
	Apr351g0229	704	MobiDBLite	consensus disorder prediction	302	316	-	-
	Apr351g0229	704	ProSiteProfiles	Protein kinase domain profile.	407	678	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr351g0229	704	PANTHER	PROTEIN STRUBBELIG-RECEPTOR FAMILY 5	18	691	-	-
	Apr351g0229	704	Gene3D	Ribonuclease Inhibitor	25	265	IPR032675	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr351g0229	6	697	Strubbelig Receptor Gene Family	AT1G78980	59.885	0.0	828

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Apr351g0229		PK_Tyr_Ser-Thr	8.3e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr351g0229	-		-	ccaj:109807669	1051.97