Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0227 ATGTGGTTTCCAAATACGAAGGCAACAACAATCAGAAAGGGGGGAAATGGATTGATTGCAGTTGCTATTGACAAGGATAGTAAAGGGAGTCGCCACGCTCTCAAATGGGCTGCGGATACTCTTCTTTCCAGAGGCCAAACTCTTGTTCTAATCCACGTTTTGCATTCTACTTCAGTATGCAACAGCACAAGCCTGGCTGCATCTCCCCATGGAGAACGAGTTTCCAATATTTGCAAGGATTTGTTCCGTACCTTCCATTGCTATTGTTCACGCAAAGATATACATTGCCTCGATGTCCTACTTGAAGACACCGATGTGATCAAAGGAATAACAGAATATGTCTCCAGTGCTGCAATTGAGACCTTGGTGCTGGGTGCAGCGTCCAGGCATGGCTTTATTAGATTCAAGTCAAGCACCCCAAGCAGCATATTGAAGGGGGTGCCAGATTTCTGCACAGTGTATGTCATTTCAAAGGGCAAAGTGTCTTCAGTTCGGAAAGCCACTCGTCCAGCCCCACATGCCTCCCCACTGCTCAACGACATACAAACCCTAAATAATGATAATTCAATTAAATCTGGGGATGTGATGTCTAGACGCATGACCTTCAGGGACAGCAGGGCAGCAAGCAAAGCTTCCAGCTGGCAGGGTGAATCAAATCAATCAATGAAAAGAGTAAGCTTCAGTAGAAGATCTTGCATGGATTTCGCTGAATCTGACACAGACATATCATTTGTGAGCTCGGGGAGGCCAAGCACCAGCAGTGCCCGTTCATCCTCTGTTTTCTGCGACTATATGGACTCTGCTCGAAATTCACGAACTTCAACCAGTTCAGATCGTAGCTTGGGATCCCGGTTGGGACTCAAGCTCACTGACCCCATTTCTCCAGATGATTCCTTTTCGATGGATAGCTCCCGAACATCTTTTTCATGTTCCGTACACAACATGGATGAAGTGGAATCTGATATGAGGAAGTTGAAGCTCGAATTAAAGCAAACAATGGAAATGTACAGTACTGCGTGCAGAGAAGCGCTAACAGCACAACAGAAGCTAGTGGAACTGAGCAACTGGAGAATGGAGGAAGAAAAGAAATTAGACGAGGCACGATTGGCCCAGGAAGCGGCACAGGCAGTTGCAGAGCAAGAGAAAGCGAGAAGTAAAGCAGCGAGGGAAACAGCTGAAGCAGCTAAGCAAATTGCAAGGGTTGAATCAAATAGAAGAGAAAGTGTGGAACTGAAAGCTCTTAAGGAGGCAGAGGAAATGAGGAAACAATTGGATAGTCTAACCCAAACTGATAAAAGATACAGAAGATACACAATTGAGGAGATTGAAAAGGCAACAGACTTTTTCTCTGAATCCCGGAAAATAGGGGAAGGAGGCTATGGCCCTGTCTATAAATGTTACCTGGATCACACTCCAGCGGCTGTCAAGGTTCTGCGTCCAGATTCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGGTTAACATTCTGGGCTGCATACGCCATCCCAACATGGTGCTTCTTCTAGGAGCTTGTCCCGAGCGTGGCATACTCATATATGAATACATGGCCAGCGGAAGCTTAGAAGATTGTCTCTTGGGAAAGAAGAAAAACGGTCCAATGTGTTGGCAGCTGAGGTTTCGAATAGCAGCAGAAATAGCCACGGGCTTACTCTTCCTCCATCAGACAAAGCCTGAACCATTGGTGCACCGTGATCTTAAACCAGGAAACATATTACTAGACCACAACTACGTTAGTAAGATAAGTGATGTTGGATTGGCCAGACTTCTCCCTGCTGTGGCTGAAAATGTGACACAATGCCGCATGACTTCAGCAGCTGGAACGTTCTGTTATATTGATCCTGAATATCAGCAAACAGGAATACTTGGCGTCAAATCTGATGTCTATTCTCTTGGGATCATACTTCTTCAATTATTGACTGGTAAGCGTCCAATGGGGCTGGCTCATCAGGTTGGAGAATCTATTGAGAAGGGCACATTTGCTGAAATCCTTGACGCATCTGTCCCTGACTGGCCTCATGTTGAAGCCCTTTGCCTTGCAAATTTGGCACTCAAATGTGCAGAACTCAGACGAAAAGACCGCCCTGACCTTGACAAACTTGTGTTGCCGGAGCTCCTCATTTTGAGAGAATTTGCACAAGAAAATATGACTCACTCCTTTTTTGGTGGAGATGCCATTAATGCACCATCCCCCACTCACAGTCAAGATTCCATTTTGCAGGATGTGATGAGCGAACCAAGGTCTGAACATTCTTTAAGCTCCAGAACCCCATCAACTCCATCAACGCCAGAAGAAGAAAAACAAGGTATTACTTTTAGTGTGTTAAATTAA 2349 0.4551 MWFPNTKATTIRKGGNGLIAVAIDKDSKGSRHALKWAADTLLSRGQTLVLIHVLHSTSVCNSTSLAASPHGERVSNICKDLFRTFHCYCSRKDIHCLDVLLEDTDVIKGITEYVSSAAIETLVLGAASRHGFIRFKSSTPSSILKGVPDFCTVYVISKGKVSSVRKATRPAPHASPLLNDIQTLNNDNSIKSGDVMSRRMTFRDSRAASKASSWQGESNQSMKRVSFSRRSCMDFAESDTDISFVSSGRPSTSSARSSSVFCDYMDSARNSRTSTSSDRSLGSRLGLKLTDPISPDDSFSMDSSRTSFSCSVHNMDEVESDMRKLKLELKQTMEMYSTACREALTAQQKLVELSNWRMEEEKKLDEARLAQEAAQAVAEQEKARSKAARETAEAAKQIARVESNRRESVELKALKEAEEMRKQLDSLTQTDKRYRRYTIEEIEKATDFFSESRKIGEGGYGPVYKCYLDHTPAAVKVLRPDSAQGKSQFQQEVNILGCIRHPNMVLLLGACPERGILIYEYMASGSLEDCLLGKKKNGPMCWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLLPAVAENVTQCRMTSAAGTFCYIDPEYQQTGILGVKSDVYSLGIILLQLLTGKRPMGLAHQVGESIEKGTFAEILDASVPDWPHVEALCLANLALKCAELRRKDRPDLDKLVLPELLILREFAQENMTHSFFGGDAINAPSPTHSQDSILQDVMSEPRSEHSLSSRTPSTPSTPEEEKQGITFSVLN* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0227 782 Gene3D Phosphorylase Kinase; domain 1 416 521 - -
Apr351g0227 782 CDD STK_N 18 159 - -
Apr351g0227 782 Pfam Protein kinase domain 450 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0227 782 MobiDBLite consensus disorder prediction 728 782 - -
Apr351g0227 782 PANTHER BNAA05G18880D PROTEIN 15 755 - -
Apr351g0227 782 SUPERFAMILY Protein kinase-like (PK-like) 425 710 IPR011009 -
Apr351g0227 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 156 - -
Apr351g0227 782 Pfam Universal stress protein family 19 145 IPR006016 -
Apr351g0227 782 Coils Coil 410 430 - -
Apr351g0227 782 Gene3D Transferase(Phosphotransferase) domain 1 522 724 - -
Apr351g0227 782 SMART serkin_6 449 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0227 782 MobiDBLite consensus disorder prediction 734 782 - -
Apr351g0227 782 ProSiteProfiles Protein kinase domain profile. 449 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0227 782 Coils Coil 315 335 - -
Apr351g0227 782 Coils Coil 364 398 - -
Apr351g0227 782 Gene3D HUPs 5 156 IPR014729 -
Apr351g0227 782 PANTHER OS02G0152300 PROTEIN 15 755 - -
Apr351g0227 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0227 1 754 Receptor kinase-like Gene Family AT1G78940 56.494 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr351g0227 Pkinase 4.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0227 - - ahf:112740428 989.178