Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0210 ATGAAGGACAAAGATAAGGAAAAGCTGAAGGATACCGAAAAGAAAAAGTTCCCCATCGGTGCCGACCATTACGTCCTGTACGAGGAGATTGGCCAAGGTGTTAGTGCTTCCGTCCACCGTGCTCTCTGCGTCCCCCTCAACGAGGTCGTCGCCATCAAAATTCTCGACTTCGAACGTGACAATTGCGATCTCAACAACGTTTCTCGCGAAGCCCAGACAATGATCCTGGTGGACCACCCTAACGTCCTCAAATCACACTGCTCCTTCGTCAGCGACCACAATCTGTGGGTGGTGATGCCGTTCATGGCGGGTGGTTCCTGCCTTCACATACTCAAAGCCGCACATCCCGACGGTTTCGAGGAGGTAGTCATCGCAACCGTTCTGAGGGAGGTGTTGAAAGGTTTGGAGTACCTTCATCATCACGGACACATCCACCGAGACGTAAAGGCTGGTAACATTCTCATCGATTCACGAGGCGCTATCAAGCTTGGCGATTTTGGTGTATCGGCTTGCCTTTTTGATTCAGGTGATCGTCAACGAACCAGGAATACCTTCGTCGGAACGCCTTGCTGGATGGCACCCGAGGTCATGGAGCAGCTGCACGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGTATAACTGCATTGGAGCTTGCCCATGGTCACGCTCCTTTCTCAAAATTTCCACCCATGAAGGTACTGCTTATGACTTTGCAAAATGCACCTCCTGGCCTTGACTATGAAAGGGATAAGAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCCAGTTGCTTAGTAAAGGATCCTTCAAAACGACCCTCTGCTGGCAAGTTGTTAAAGCATTCATTCTTTAAGCAGGCTCGCTCCAATGATTATATTGCACGGACACTTTTGGAGGGGCTTCCTGCTTTAGGTGATCGCATGGAGGCCCTAAAGAGAAAAGAAGAAGATATGCTTGCACAGAAGAAAATGCCTGATGGGAAGATGGAGGAATTGTCACAGAATGAATACAAACGTGGAATTAGTGGCTGGAACTTCAATCTTGAAGATATGAGGGCTCAGGCTTCTTTGATCCATGATTTCGACGATGCTATATCAGATATCTGTAATGCAGCAAGTTCATCTTCTTTATCTACGCTCGATGCACAAGATAAGCAATTGCCAAGTGCAGTTCACAACCCTTCTCAAACTGCTGATACGGAAGAAAATGATGAGGTGCGAAATCAATCAGCTTCTGTTCCGGTAGTTGATTCTGCAGTAAATGATGCAAAGACTAGGTTTGAAAAATCTGATGATGATTCCAGCATCACCAGTTCAAGCCATGAACCGCAAACTTCTTCGTCCTGTCTCGATGATCATGCGGACCACAATGTTGGTGAAAAATCTGATATGGAAAATGGTGGAAGATTTGTGGAGGGCATGGCTACTCATTCTTTTCATAGAAGAGGGTGTTCATCAAGCATCTTACCTGAAGTTACTCTTCCACCTATTCGACCAGAAAGTTGCCATGCAACTTCAGCTTCACAGACAGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGTTAATTCTGATGACACTGATGAGAAATCAAAGGTACCAGTTGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGATAAGGTGGGCCCTTCTCCTGTACTGCAAAAGAGTCATAGCATGCAGGTTTTTAGCCAGCACAATGCTACTCCTCTGCATTCACCTTTACCATTATTACCAGCATCTACTGATGCCTCGTCATCAAATCTTTCTGGCTGTTCTCTGTTTCCTGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAAAGGGAGAGCATTTTAAGTTTAATGAAGCAAATTACTCCCAGTGACTCTGCAGCTGATGGCTCGTGTACCTCAGCAGCACAGATAGCAGCAACTGAGAAATCTTTGCTTGAAGCAGCTCACGAAAGGGAGAAGGAGTTACTTCATGAGATAACTGAGTTGCAATGGAGGCTTATATGTACCCAGGAGGAGCTTCAAAAATTGAAAACAGATAACGCCCAGGTGTGA 2085 0.4571 MKDKDKEKLKDTEKKKFPIGADHYVLYEEIGQGVSASVHRALCVPLNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDKKFSKSFKQMIASCLVKDPSKRPSAGKLLKHSFFKQARSNDYIARTLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMRAQASLIHDFDDAISDICNAASSSSLSTLDAQDKQLPSAVHNPSQTADTEENDEVRNQSASVPVVDSAVNDAKTRFEKSDDDSSITSSSHEPQTSSSCLDDHADHNVGEKSDMENGGRFVEGMATHSFHRRGCSSSILPEVTLPPIRPESCHATSASQTGEDVLTELPSRVSKSSVNSDDTDEKSKVPVVQQRGRFKVTSENVDPDKVGPSPVLQKSHSMQVFSQHNATPLHSPLPLLPASTDASSSNLSGCSLFPVLHSVLQTNILQRESILSLMKQITPSDSAADGSCTSAAQIAATEKSLLEAAHEREKELLHEITELQWRLICTQEELQKLKTDNAQV* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0210 694 MobiDBLite consensus disorder prediction 503 527 - -
Apr351g0210 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 693 - -
Apr351g0210 694 MobiDBLite consensus disorder prediction 423 437 - -
Apr351g0210 694 CDD STKc_OSR1_SPAK 22 285 - -
Apr351g0210 694 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Apr351g0210 694 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0210 694 MobiDBLite consensus disorder prediction 438 453 - -
Apr351g0210 694 MobiDBLite consensus disorder prediction 381 398 - -
Apr351g0210 694 Gene3D Transferase(Phosphotransferase) domain 1 105 338 - -
Apr351g0210 694 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0210 694 MobiDBLite consensus disorder prediction 381 469 - -
Apr351g0210 694 MobiDBLite consensus disorder prediction 496 540 - -
Apr351g0210 694 MobiDBLite consensus disorder prediction 454 468 - -
Apr351g0210 694 Pfam Protein kinase domain 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0210 694 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Apr351g0210 694 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Apr351g0210 694 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 693 - -
Apr351g0210 694 Coils Coil 670 690 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0210 13 676 MAP Kinase Kinase Kinase Kinase AT1G79640 62.573 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Apr351g0210 Pkinase 2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0210 K08835 - gmx:100780339 1180.24