Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0207 ATGATGAGGCCAAAGCAACTGACACCGCCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCGCCTCCGCATCCAACCCCAAGGACCGTTCCCAGCGCCGCCGCAAAGACCTCACCCTGCCGCTGCCGCAGAGGGACACCAAATTGGCGGTGCCGCTTCCGCTGCCACCGTCCACGACGACGGCAACGTCGACGTCCGCGGCGAACCAGCTGTTGATTCCGTTCGCGGAGCTGGAGCGGCAGAACCGCATCGGGAGCGGGAGCGGGGGGACGGTGTACAAGGTGGTTCACCGGACAACCGGTCGCGTGTACGCTCTGAAGGTGATATACGGTCATCACGAGGAGTCGGTGCGGCGGCAGATCCACCGGGAAATCCAGATCCTGCGCGACGTGGACGATCCGAACGTGGTTAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTTCTGTTGGAGTTCATGGACGGTGGTTCTCTGGAGGGGAAACACATCCCTCAGGAGCAGCATCTGGCAGATCTGTCTCGGCAGATTCTGCGGGGGCTTGCGTACCTTCACCGTCGACACATCGTTCACAGAGACATAAAACCTTCGAATCTGCTGATAAACTCGCGGAAGCAGGTGAAGATCGCTGACTTCGGTGTTGGTCGGATTCTGAATCAGACGATGGATCCTTGCAATTCGTCGGTGGGGACGATCGCGTACATGAGTCCTGAGAGGATAAATACAGACATCAATGACGGTCAATACGACGCATACGCTGGAGACATATGGAGCTTTGGTGTTAGCATCTTGGAGTTCTACATGGGAAGATTCCCCTTTGCTGTTGGTAGGCAAGGTGATTGGGCGAGCTTGATGTGTGCTATTTGTATGTCTCAGCCTCCTGAGGCTCCTCCTTCTGCTTCTCCTCAGTTCAGGGATTTCATCTCTCGCTGTTTGCAGCGCGATCCCTCTCGCAGATGGTCTGCTTCTAAGTTGCTCGAACACCCCTTCATTGCTCTGCCCAGTCCTGGCCCCAATCACAACCACAACCTCCATCAACTCCTCCCTCCTCCTCCCATCAGGCCTCCTCTTTCGTCCTAG 1083 0.5706 MMRPKQLTPPAASSSSSSSSASASNPKDRSQRRRKDLTLPLPQRDTKLAVPLPLPPSTTTATSTSAANQLLIPFAELERQNRIGSGSGGTVYKVVHRTTGRVYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPQEQHLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASPQFRDFISRCLQRDPSRRWSASKLLEHPFIALPSPGPNHNHNLHQLLPPPPIRPPLSS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0207 360 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Apr351g0207 360 MobiDBLite consensus disorder prediction 8 26 - -
Apr351g0207 360 Gene3D Phosphorylase Kinase; domain 1 57 156 - -
Apr351g0207 360 MobiDBLite consensus disorder prediction 27 41 - -
Apr351g0207 360 MobiDBLite consensus disorder prediction 1 63 - -
Apr351g0207 360 SUPERFAMILY Protein kinase-like (PK-like) 77 349 IPR011009 -
Apr351g0207 360 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 29 352 - -
Apr351g0207 360 ProSiteProfiles Protein kinase domain profile. 77 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0207 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Apr351g0207 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 29 352 - -
Apr351g0207 360 Gene3D Transferase(Phosphotransferase) domain 1 159 343 - -
Apr351g0207 360 CDD PKc_MAPKK_plant_like 75 332 - -
Apr351g0207 360 Pfam Protein kinase domain 78 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0207 360 SMART serkin_6 77 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0207 2 347 MAP Kinase Kinase Gene Family AT1G51660 67.956 1.63e-170 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Apr351g0207 Pkinase 5.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0207 K13413 - gmx:100786390 571.237