Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0195 ATGCATTTCCCACTCCGAAACGAGGCTCCTTTTGATACCGATAGTGATATATACTCAGCAAGTGGGAACTCCATTCCAGAAATATATGAATTCATCGTCTTACCCATATCCATCATCGTTCAGCAAGCAGCACTTGTGCTCAATGCGTCCAGGCGTTTTAGATATACTCTGGACTTGAGAAGGGAAGAAGAGAAAGAGCAAAAGAAACGCTTGATTAGAGCCCATGCACAAGTTATCAGAGCAGCACTGCTTTTCAGATTGGCTGGCGAACGTGAACTAGTGATAAGTACAGCAGTGACTCCCCCAACTCCAGTTGGTGACTATGGTATTGGGCTTGAACAACTTGTTTCGATATCTAAGGATCAGAATTTTTCTTCTTTACAACAATATGGAGGGGTTAGAGGCTTATCAAGTTTAATAAAATCTAATCCAGAGAAAGGAATCAATGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTCTGGAGGTTTCTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATTATAGCTGCTGCTGTGTCATTAGTGCTTGGAATAAAAACAGAGGGTTTGGATGAAGGATGGTATGATGGTGGAAGCATTTTTTTTGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTTTGCAATTTCAGAATTTGAATGCCGAAAAACAAAATATACAGTTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATATCAATATTTGATATTGTTGTTGGTGACGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACTGGCCATTCACTTGCAATGGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAGCACCCTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCGCTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTATAGTTGGGCTTACTGTAGCTGTTGCAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCTGGCCATACGAAAGATGTAGATGGACATGTCGAATTTGTTGCTGGAAAGACTAGTGTTAGCAATGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCTGTCACAATTGTGGTAGTTGCTGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACTTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTAAGGCGGCTATCAGCTTGTGAAACTATGGGTTCTGCTACAACAATTTGCAGTGATAAAACTGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAAGGCGAAACTAAATCCACCAGATGACTCATCTAAGTTGCATCCAGAAGTATTGTCTCTGATAAATGAGGGCATTGCCCAGAATACAACTGGAAATGTTTTTGTGCCTAAGGATAGTGGAGAAACAGAGGTGTCGGGATCTCCTACGGAAAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATCAGATCAAATTCAACAGTCCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAGCTGGGCGATTCTGGAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGAACATGTACTCAATATGTTGATTCAAATGGTCAATTGCAATCCATTGAAGAGGAGAAGGCTTTTTTCAAGAAGGCAATTAATGACATGGCTGCTCATAGCTTGCGTTGTGTTGCCATTGCATATAGATCATATAAATTAGAGAAAGTTCCATCTAATGAGGAGGATTTAGACCAATGGTCCTTACCAGAAAATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGGCCTGGTGTCAAAGATGCTGTGAAAGTATGCACTGATGCCGGTGTTAAGGTACGCATGGTTACTGGTGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATACTGGCTTCAAATGAAGATGCCGTTGAGCCAAATATAATTGAAGGAAAGAAATTCCGTGAATTGTCTGAAAAAGAGAGAGAACAATTTGCAAAGAAAATAACAGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTACTTGTGCAAGCACTACGGAAAGGAGGTGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCTTAGATGATAACTTTGCATCAGTAGTTAAGGTTGTCCGTTGGGGCCGCTCTGTATATGCAAATATTCAGAAGTTTATCCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAAGTTCCGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGATACACTCGGGGCCCTTGCACTGGCTACTGAACCGCCAACTGACCACCTAATGCACAGATCTCCAGTTGGCCGAAGGGAACCTCTTATAACGAATGTCATGTGGAGAAACTTGGTCGTACAGGCTCTGTACCAAATCGTTGTTCTTCTCGTTCTTAACTTCGGCGGTGAAAGTATTCTACCTAACCAAGATACTAGAGCTCAAGGCTTTCAAGTGAAGAATACTTTAATATTCAATGCGTTCGTTATGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCAGATGAAATGAATGTTTTTCGGGGAGTGACTAAGAACCGTCTGTTCATGGGAATTGTTGGAGTGACCTTTATTCTTCAGATAATTATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGGCTTGATTGGAAGCTGTGGCTTGCTTCTCTTTGTATTGGCTTTGTCAGTTGGCCTCTTGCTATAGCCGGAAAATTCATTCCAGTTCCCAAAACACCACTTGCCCGTTACTTCTTGAAGCCACTCAGGCGATTAAGGAGGTCTCGTGCTACACAATAA 3201 0.4142 MHFPLRNEAPFDTDSDIYSASGNSIPEIYEFIVLPISIIVQQAALVLNASRRFRYTLDLRREEEKEQKKRLIRAHAQVIRAALLFRLAGERELVISTAVTPPTPVGDYGIGLEQLVSISKDQNFSSLQQYGGVRGLSSLIKSNPEKGINGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLDEGWYDGGSIFFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAMDESSMTGESKIVHKDHKAPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVAVLAVLLGRYFSGHTKDVDGHVEFVAGKTSVSNAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGKAKLNPPDDSSKLHPEVLSLINEGIAQNTTGNVFVPKDSGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGVHIHWKGAAEIVLGTCTQYVDSNGQLQSIEEEKAFFKKAINDMAAHSLRCVAIAYRSYKLEKVPSNEEDLDQWSLPENELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASNEDAVEPNIIEGKKFRELSEKEREQFAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNVMWRNLVVQALYQIVVLLVLNFGGESILPNQDTRAQGFQVKNTLIFNAFVMCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLCIGFVSWPLAIAGKFIPVPKTPLARYFLKPLRRLRRSRATQ* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0195 1066 SFLD C1.7: P-type atpase like 455 832 - -
Apr351g0195 1066 PANTHER CATION TRANSPORTING ATPASE 41 1058 - -
Apr351g0195 1066 Gene3D - 483 680 IPR023299 GO:0000166
Apr351g0195 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 409 501 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr351g0195 1066 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 748 860 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr351g0195 1066 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 120 1043 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Apr351g0195 1066 SUPERFAMILY Calcium ATPase, transduction domain A 251 346 IPR008250 -
Apr351g0195 1066 SUPERFAMILY HAD-like 471 885 IPR036412 -
Apr351g0195 1066 Gene3D - 154 349 - -
Apr351g0195 1066 Gene3D - 181 1031 - -
Apr351g0195 1066 Gene3D - 41 86 - -
Apr351g0195 1066 SFLD p-type atpase 455 832 IPR044492 -
Apr351g0195 1066 SUPERFAMILY Calcium ATPase, transmembrane domain M 131 1043 IPR023298 -
Apr351g0195 1066 Pfam Cation transporter/ATPase, N-terminus 131 198 IPR004014 -
Apr351g0195 1066 PANTHER CALCIUM-TRANSPORTING ATPASE 41 1058 - -
Apr351g0195 1066 Gene3D - 470 825 IPR023214 -
Apr351g0195 1066 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 480 677 IPR023299 GO:0000166
Apr351g0195 1066 CDD P-type_ATPase_Ca_PMCA-like 155 913 - -
Apr351g0195 1066 Pfam E1-E2 ATPase 250 451 - -
Apr351g0195 1066 Pfam haloacid dehalogenase-like hydrolase 470 794 - -
Apr351g0195 1066 ProSitePatterns E1-E2 ATPases phosphorylation site. 475 481 IPR018303 -
Apr351g0195 1066 Pfam Cation transporting ATPase, C-terminus 865 1040 IPR006068 -
Apr351g0195 1066 SMART Cation_ATPase_N_a_2 129 203 IPR004014 -
Apr351g0195 1066 PRINTS Sodium/potassium-transporting ATPase signature 216 236 - -
Apr351g0195 1066 PRINTS Sodium/potassium-transporting ATPase signature 466 487 - -
Apr351g0195 1066 PRINTS Sodium/potassium-transporting ATPase signature 592 610 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 297 311 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 473 487 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 673 684 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 695 705 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 780 799 - -
Apr351g0195 1066 PRINTS P-type cation-transporting ATPase superfamily signature 804 816 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0195 41 1063 Primary Pumps ATPases AT3G21180 78.320 0.0 1634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0195 K01537 - gmx:100777845 1809.65