Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0182 ATGGCGAAGAAATCGCAGAAAAGCCTCAAGAACACTACCACCACCAACAACACTACCAAACGGACACGCAAAACTGTCCCAAGAGACTCACCTCCACAACGAAGCTCAATCTACCGTGGTGTCACAAGGCATCGATGGACTGGTCGGTACGAGGCTCATTTGTGGGATAAGAATTGTTGGAACGAATCACAAAGCAAAAAAGGAAGACAAGTATATCTAGGAGCATATGATGATGAAGAAGCCGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGATACCATTCTCAATTTTCCATTATCGAATTATGAGGAGAAGCTCAAGGAGATGGAGGGCCAGTCAAAAGAAGAATATATTGGATCCTTAAGAAGAAAAAGCAGTGGGTTCTCTCGAGGAGTTTCAAAATACAGAGGCGTAGCAAGACACCACCACAACGGAAGATGGGAAGCTCGAATTGGCAGGGTCTTTGGCAACAAATATCTATATCTTGGAACTTATGCTACACAAGAAGAAGCTGCCACAGCATATGACATGGCAGCCATAGAATACAGAGGACTTAACGCCGTTACTAACTTTGACCTTAGCCGTTATATCAATTGGCTCCGTCCAAAAACCCAAGAAAACCATGAAAATCCAAGCAATGAAGATCTACACTCAAATCCTGAACTTGAATTAGGGTTTGTTTCCCATAAACTTGATTCAACCAGTGGTGAGAATGAGATAACCCAAGAGGGTGAAATACGATCTGGTGGTGGCGCATCAACAACATCTTCTGCACTTGGCCTTCTCTTACAATCATCCAAATTCAAAGAAATGATAGAAAAAACTTCTTCAGCTTCAGATTACCCTCCACCACCTCCAGAGTCAAACCCTCCTCGTCGAACGTTCCCCGAAGATATTCAAACAATTTTCGAAAGTCAAGGTTCTGGTATCTACACTGAAAATGATGACATCATATTTGGTGACTTGAGTTCGTTTGCTGCACCAATTTTTCATTATGAGCTTGATGCTTAG 1026 0.4308 MAKKSQKSLKNTTTTNNTTKRTRKTVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLSNYEEKLKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYINWLRPKTQENHENPSNEDLHSNPELELGFVSHKLDSTSGENEITQEGEIRSGGGASTTSSALGLLLQSSKFKEMIEKTSSASDYPPPPPESNPPRRTFPEDIQTIFESQGSGIYTENDDIIFGDLSSFAAPIFHYELDA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0182 341 Pfam AP2 domain 138 189 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 Pfam AP2 domain 37 95 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 SUPERFAMILY DNA-binding domain 138 199 IPR016177 GO:0003677
Apr351g0182 341 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 327 - -
Apr351g0182 341 SUPERFAMILY DNA-binding domain 36 105 IPR016177 GO:0003677
Apr351g0182 341 ProSiteProfiles AP2/ERF domain profile. 139 197 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 Gene3D AP2/ERF domain 138 199 IPR036955 GO:0003700|GO:0006355
Apr351g0182 341 Gene3D AP2/ERF domain 37 105 IPR036955 GO:0003700|GO:0006355
Apr351g0182 341 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 PRINTS Ethylene responsive element binding protein signature 179 199 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 CDD AP2 138 199 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 SMART rav1_2 139 203 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 SMART rav1_2 37 109 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 MobiDBLite consensus disorder prediction 277 300 - -
Apr351g0182 341 ProSiteProfiles AP2/ERF domain profile. 37 103 IPR001471 GO:0003700|GO:0006355
Apr351g0182 341 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR-RELATED 1 327 - -
Apr351g0182 341 MobiDBLite consensus disorder prediction 238 258 - -
Apr351g0182 341 MobiDBLite consensus disorder prediction 1 21 - -
Apr351g0182 341 MobiDBLite consensus disorder prediction 1 39 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0182 33 201 AP2-EREBP Transcription Factor Family AT5G57390 74.556 1.18e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Apr351g0182 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0182 K09285 - gmx:100819898 484.567