Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0180 ATGGAGAAGTACGAGAAGCTTGAGAAGGTTGGAGAAGGAACGTATGGGAAGGTGTACAAGGCGAGGGAGAAGTCCACTGGTCAACTCGTTGCTCTCAAGAAGACGCGTCTTGAGATGGACGAAGAAGGTAAATTCATCGATTCACACCGCAAAGGTACCAATCCTCGTCCTCTTCCTTCTTCCCTCGTTCAGAGCTTCCTCTTTCAGCTCTGCAAGGGCGTTGCTCACTGCCACAGCCACGGCGTTCTCCACCGCGACCTTAAGCCTCAAAATCTTCTTCTTGACCAGCAGAAGGGGATTCTCAAGATCGCCGATCTTGGTCTCGGTCGTGCATTCACTGTCCCTCTCAAGAGCTACACTCACGAGATTGTCACGCTCTGGTATAGAGCCCCTGAGGTTCTCCTTGGATCCACTCACTACTCCACCAGCGTTGACATGTGGTCCGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAAGCTCTGTTTGCGGGGGATTCTGAGTTTCAGCAACTCATCAACATTTTCAAGATTATGGGGACTCCAACGGAGGAGCAATGGCCAGGGGTTACTTCTCTGCGTGATTGGCATGTCTACCCGCACTGGGAACCGCAGAACTTGGCACGCTCTGTGCCCTTATTGGGACCAGAAGGAGTTGACCTTCTCTCGAAAATGCTCAAGTATAATCCTTCTGAGAGAATATCTGCCAAGGCAGCACTTGATCATCCCTACTTTGACAGTCTTGACAAGTCACAATATTGA 762 0.5052 MEKYEKLEKVGEGTYGKVYKAREKSTGQLVALKKTRLEMDEEGKFIDSHRKGTNPRPLPSSLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTSVDMWSVGCIFAEMVRRQALFAGDSEFQQLINIFKIMGTPTEEQWPGVTSLRDWHVYPHWEPQNLARSVPLLGPEGVDLLSKMLKYNPSERISAKAALDHPYFDSLDKSQY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0180 253 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0180 253 PANTHER CELL DIVISION PROTEIN KINASE 1 43 - -
Apr351g0180 253 PANTHER CELL DIVISION PROTEIN KINASE 44 253 - -
Apr351g0180 253 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Apr351g0180 253 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Apr351g0180 253 PANTHER CYCLIN-DEPENDENT KINASE B1-2 44 253 - -
Apr351g0180 253 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 43 - -
Apr351g0180 253 SUPERFAMILY Protein kinase-like (PK-like) 1 248 IPR011009 -
Apr351g0180 253 Gene3D Transferase(Phosphotransferase) domain 1 55 253 - -
Apr351g0180 253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Apr351g0180 253 SMART serkin_6 4 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0180 253 Pfam Protein kinase domain 58 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0180 1 253 Core Cell Cycle Gene Families AT2G38620 84.190 3.19e-165 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Apr351g0180 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0180 K07760 - csv:101204557 457.988