Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0166 ATGTTTGACTCTGGTTACAAGTCACAGTATATTGGAGGCCAGAAGGAGAAGTTTGTAAGGTTGGATGATCTGGATTCCAATTTGTCTATGTCATCTGGTTCAAGTGGGATGAAGAAATTAAGATTTAACTTAGATTCTTTGCCTCTGCCTCTTCCTGGTCGTGGAAGAAAAAAAGCATCGAAATCCTTTAGGCTAGGAGTCAAGAAGGGTTCAGATGGACTCAAGACATTTGGAAGATCACTCAAAAGTGGAGTCACTTTTGCAGTATTCCCAGAAGATCTTAAAGTCTCAGAGAAAAAAGTATTTGATCCTCAAGATAAGAACCTTCTCTATTGGAACAAGTTTTTCGAGATTCTATGCATTTTTTCTGTAGCTTGTGATCCATTCTTCTTCTATCTTCCTTATTTCAACCACAAATCATTTTGTCTCGCCATAGACAACAAGCTAGCACGTTTTGCCGTTACATTAAGAACAATATGTGATGTCGTTTATCTTCTCCGCATAAGTTTTCAATTCCGCACTGCTTATATTGCACCTTCATCTCGAGTATTTGGACGAGGTGAACTTGTCATTGATCCTGCACAAATTGCCAAGAGATATTTACAACGTTACTTCATTGTTGACTTCATTTCTGTGCTGCCTATGCCACAGATTATAGTGTGGAAATATCTTTACAGAACAGGACGTGTAGAGGTATTGGCCACAAAAACGGCACTGTTGAGAATTGTCATCTTGCAATATTTTCCAAGATTTCTACGCTTTATACCTTTAGCTTCAGAAGTTAAAAAAACAGCTGGTGTTTTCTCTGAAAACGCATTGCTCGGTGCCATGTACTATTTGATCTGGTATATGCTTGCTAGTCATATAACTGGCTCTGTCTGGTATTTGTTAGCCATCGAACGAAATGACACATGCTGGAAGAATGCTTGTAAAGAAGTGGATGGATGCAATACACATTTCTTGTATTGTGGGAGTTCCAACAAGCATCTGACAGGGTATGAAAGTTGGAGAAATGTCAGCGAAACTGTTCTTAAAAGTCGCTGCTTTGTTGAGGATGATACCTCAGCATTCAATTATGGAATCTTCTCTCAAGCTATACAGTCTGATATTGTGGCTTCCATTGAAGTCTTTCCTAAATTCTGTTACTGTTTATGGTGGGGGCTTCAAAATTTGAGTACACTTGGTCAGGGGCTTCTAACCAGTACCTACCCTGGAGAGGTTATGTTTTCCATAGTAATAGCTATTTCGGGGCTTGTCCTTTTCGCTCTTCTGATTGGAAACATGCAGACCTATCTTCAATCAATGTCAGTTCGTCTCGAGGAAATGAGGATCAAAAGACGTGACTCTGAGCAGTGGATGCACCATCGTTTGCTTCCTCCAGAGCTAAGGGAAAGGGTGAGACGCTATGACCAATACAAGTGGCTGAACACTCGAGGAGTAGATGAAGAGAGTTTGGTTCAAAGTCTACCAAAAGATCTAAGGAGAGATATCAAACGGCATCTTTGTTTGAATTTGGTTAGAAGGGTTCCTCTCTTTGCTAACATGGATGAACGGTTGCTTGATGCTATATGTGAGCGATTGAAGCCTAGTTTGTATACAGAAGCCACTTACATAGTTAGAGAAGGGGACCCAGTTAATGAGATGCTCTTCATCATTCGTGGTCGTCTAGAGAGTGTTACTACAGATGGAGGAAGAAGTGGATTTTTCAACAGAGGTCTTCTGAAAGAAAATGACTTCTGTGGAGAAGAGCTACTAACATGGGCATTGGACCCCAAATCTGCCGCTAACTTGCCATCATCAACAAGGACAGTGAAGGCTATAAATGAGGTTGAGGCATTTGCATTGGAAGCAGAGGAGTTGAAGTTTGTAGCTTCCCAGTTTAGGCACATTCACAGTAGACAGGTTCAGCACACTTTCCGTTTCTACTCACAGCAGTGGAGAACGTGGGCTGCAATATACATCCAAGCTGCATGGAGGCGGCATTGCAGGAGAAAGATTGCAGAGCAACGCCGGAAGGAGGAAGAAGAATTTTATGATTCTGATTGTGAAGGAAGTGATGATTCTGCAAGGGCCTTGGTCACGCGTAATGCATCTTCTTCTTCTTCTTCAAGGTTCGGACTTAGTGCAACCGTCTATGCTTCTCGCTTTGCCGCCAGTGCCCTCCGTGGTCATAGGCTTCGCGGTTCAAGTTCCAGGGAGCTGGTCAAACTCCAAAAGCCCCCAGAACCTGACTTCAGTGATCTAGATGAAAATTGA 2256 0.4215 MFDSGYKSQYIGGQKEKFVRLDDLDSNLSMSSGSSGMKKLRFNLDSLPLPLPGRGRKKASKSFRLGVKKGSDGLKTFGRSLKSGVTFAVFPEDLKVSEKKVFDPQDKNLLYWNKFFEILCIFSVACDPFFFYLPYFNHKSFCLAIDNKLARFAVTLRTICDVVYLLRISFQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRYFIVDFISVLPMPQIIVWKYLYRTGRVEVLATKTALLRIVILQYFPRFLRFIPLASEVKKTAGVFSENALLGAMYYLIWYMLASHITGSVWYLLAIERNDTCWKNACKEVDGCNTHFLYCGSSNKHLTGYESWRNVSETVLKSRCFVEDDTSAFNYGIFSQAIQSDIVASIEVFPKFCYCLWWGLQNLSTLGQGLLTSTYPGEVMFSIVIAISGLVLFALLIGNMQTYLQSMSVRLEEMRIKRRDSEQWMHHRLLPPELRERVRRYDQYKWLNTRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTEATYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKENDFCGEELLTWALDPKSAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRHIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRRHCRRKIAEQRRKEEEEFYDSDCEGSDDSARALVTRNASSSSSSRFGLSATVYASRFAASALRGHRLRGSSSRELVKLQKPPEPDFSDLDEN* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0166 751 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 748 - -
Apr351g0166 751 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 748 - -
Apr351g0166 751 CDD CAP_ED 511 642 IPR000595 -
Apr351g0166 751 Gene3D Jelly Rolls 509 629 IPR014710 -
Apr351g0166 751 Pfam Ion transport protein 111 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Apr351g0166 751 ProSiteProfiles cAMP/cGMP binding motif profile. 511 594 IPR000595 -
Apr351g0166 751 Gene3D Helix hairpin bin 438 502 - -
Apr351g0166 751 ProSiteProfiles IQ motif profile. 647 676 IPR000048 GO:0005515
Apr351g0166 751 SMART cnmp_10 511 642 IPR000595 -
Apr351g0166 751 MobiDBLite consensus disorder prediction 726 745 - -
Apr351g0166 751 Gene3D - 113 436 - -
Apr351g0166 751 MobiDBLite consensus disorder prediction 724 751 - -
Apr351g0166 751 SUPERFAMILY cAMP-binding domain-like 441 631 IPR018490 -
Apr351g0166 751 SUPERFAMILY Voltage-gated potassium channels 104 433 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0166 6 745 Ion Channels AT1G15990 69.826 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0166 K05391 - gmx:100810453 1320.84