Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0159 ATGGATTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCTCACAAAGTTCATGAAGAAATTCCCAAGGAGGTGGAAAGCAAGCTTTTCTCGTTAGGTATGACCAAGTTTTCTGAGGAAGAAGAGTCCACTAGTGACTTGGAGGAGGAACTGAAGAGGGTGACTGCAGAAAACAAGAAGTTGGCTGAAATGCTCTCAGTGGTGTGTGAAAACTACAACACTTTGAGAAGCCATTTGATGGACTACATGAGGAGAAATCCTGAGAAGGAGCAAAGCCCATCTTCAAAGAAAAGGAAATCTGAAAGCAGCAACAACAATAGTAATCTGATGGGAATCAACAACGGAAATTCAGAGAGCAGCTCTACTGATGAAGAATCATGCAAGAAGCCCAGGGAAGAAACCATCAAAGCAAAGATTTCAAGAGTTTATGTCAGAACAGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGATACCAATGGAGGAAGTATGGGCAAAAGGTGACCAGGGATAACCCATGTCCAAGAGCCTATTTCAAATGCTCTTTTGCTCCAAGTTGCCATGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTGCTTGTTGCTACATATGAAGGGGAGCACAATCATCCTCAGCCTTCTCAAATGGAGGCAACATCAGGTTCAGTGCCTTGTGCAGGATCTCTCAGCACTTCTGCTCCAACAGTTGTTACCCTTGACTTAACAAAATCTAAGTGCAGCAACGATTCCAAGAGTACAAAACCTAAAGTACCTCAGAATTTGGTTGAACAGATGGCTAATTCTTTGACCACGGATCCTAATTTCAGAGCAGCACTCGTTGCTGCCATCTCAGGAAGATTGTTGCACAAGAATTAA 894 0.4228 MDCSSWINTSLDLNINPHKVHEEIPKEVESKLFSLGMTKFSEEEESTSDLEEELKRVTAENKKLAEMLSVVCENYNTLRSHLMDYMRRNPEKEQSPSSKKRKSESSNNNSNLMGINNGNSESSSTDEESCKKPREETIKAKISRVYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCHVKKKVQRSVDDQSVLVATYEGEHNHPQPSQMEATSGSVPCAGSLSTSAPTVVTLDLTKSKCSNDSKSTKPKVPQNLVEQMANSLTTDPNFRAALVAAISGRLLHKN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0159 297 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr351g0159 297 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr351g0159 297 MobiDBLite consensus disorder prediction 101 124 - -
Apr351g0159 297 Coils Coil 40 67 - -
Apr351g0159 297 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 297 IPR044810 GO:0003700
Apr351g0159 297 MobiDBLite consensus disorder prediction 87 135 - -
Apr351g0159 297 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr351g0159 297 Pfam WRKY DNA -binding domain 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr351g0159 297 Gene3D WRKY domain 141 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr351g0159 297 PANTHER TRANSCRIPTION FACTOR 1 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0159 4 297 WRKY Transcription Factor Family AT1G80840 53.185 2.20e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr351g0159 WRKY 2.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0159 - - gmx:100807966 483.026