Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0156 ATGACTGGCACAGCTTCATCTTCTGGGCAGCTGCAGTTTATTGCGAGCACCGGCGGTAACCGGAGCTTGTCCAATGCGCCCCTGATTGAGAACTCCGAAACTGATCAAATTGTTGTACCTGATAGGAAAAGCTGGAAAAACTTATTTGCATACGTGGGGCCCGGATTTCTTGTTTCCATTGCGTATATAGACCCAGGAAACTTTGAGACGGATCTTCAGTCAGGGGCACAATATAAATATGAGTTACTTTGGATCATATTGGTGGCGTCATGTGCTGCTCTTCTAATTCAATCTATGGCAGCCAATCTTGGGGTTGTCACTGGAAAGCATTTAGCAGAACATTGTAGGACTGAATATTCTCGGGTACCCAACTTTATACTTTGGGTTATTGCTGAAATTGCCGTAGTGGCATGTGACATTCCCGAAGTTATTGGGACAGCCTTTGCATTGAACATGCTTTTCAACATTCCTGTTTGGGTTGGTGTTCTTCTGACAGGATTCAGTACATTGATCCTCTTAGCGTTACAGCAATATGGGGTTAGGAAACTGGAATTCTTGATTGCATTTCTAGTGTTTACAATTGCTGCATGTTTTATGGTTGAGCTTGGATATGCAAAGCCCGACGCCAAAGAAGTTTTGAATGGTCTTTTTGTTCCAAAACTTAACGGGAATGGTGCTACTGGTCTTGCAATTTCACTCGTTGGGGCTATGGTTATGCCCCACAATCTCTTTCTCCACTCAGCGCTCGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCCAAGAAGCTTGCAGATTTTACATGATAGAAAGTGCATTTGCTCTTATGGTGGCCTTCCTCATAAACATTTCAGTTATTTCGGTTAGTGGTTCAGTTTGCAATTCTTCAAACTTAAGTGCTGAAGATCAAGTTAGCTGTCAGGATTTGGATTTGAACAAAGCCTCATTTCTATTAAGAAATGTCTTGGGAAAATGGAGTTCAAAACTATTTGCAGTTGCTTTACTTGCGTCAGGTCAAAGTTCAACTATAACAGGAACATATGCAGGGCAATACGTCATGCAGGGATTTCTCGATTTTCGACTGAAGTCATGGATTAGGAATCTGTTAACTCGTTGCTTAGCCATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGCTCTGCTGGAGCTGGGAAGCTCATAATAATTGCATCGATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTTCTCAAGTTCACTAGCAGTAAAACCAAGATGGGAGTGCATGTCAACTCAATCACGATTTCGACGGTTACTTGGATCATTGGTTCCCTCATTATGGGCATAAATATATATTATTTATTGACTAGCTTCGTCAAGTTGCTTCTTCACAGTCACTTAAAAATGGTTGTTAAAGTGTTTCTGGGGATATTAGGAATCTCTGGTGTGGCAGTGTATATGGCTGGCATTGCTTATTTAGTGTTTCGCAAAAATAAAAAAGCTACGCACCTTGTGGCACTTGACATGCCGGAAGATCAGCAAATAGCAAATGAACAAGGCAATGTATCAATGTATAGTCTCCCAAGAGAAGACATAATAAGCATGCAATTACCCCAAAGAAGTAGTCCAGCAGAATTTTACTAA 1638 0.4139 MTGTASSSGQLQFIASTGGNRSLSNAPLIENSETDQIVVPDRKSWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQSMAANLGVVTGKHLAEHCRTEYSRVPNFILWVIAEIAVVACDIPEVIGTAFALNMLFNIPVWVGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTIAACFMVELGYAKPDAKEVLNGLFVPKLNGNGATGLAISLVGAMVMPHNLFLHSALVLSRKIPRSVRGIQEACRFYMIESAFALMVAFLINISVISVSGSVCNSSNLSAEDQVSCQDLDLNKASFLLRNVLGKWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDFRLKSWIRNLLTRCLAIVPSLIVALIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGVHVNSITISTVTWIIGSLIMGINIYYLLTSFVKLLLHSHLKMVVKVFLGILGISGVAVYMAGIAYLVFRKNKKATHLVALDMPEDQQIANEQGNVSMYSLPREDIISMQLPQRSSPAEFY* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0156 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 47 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PANTHER METAL TRANSPORTER NRAMP1 12 541 - -
Apr351g0156 545 Hamap Divalent metal cation transporter MntH [mntH]. 40 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 Pfam Natural resistance-associated macrophage protein 68 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 230 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Apr351g0156 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 12 541 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0156 16 538 Inorganic Solute Cotransporters AT1G15960 80.306 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0156 K21398 - gmx:100815628 942.184