Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0148 ATGGATCTACAAAGACCTGAGCCATGCCCAAAACCTTCTATGGACATTCAAACAGAAAGGAGACAGACAGAAAAGGAAGATCAAAAACACCAACATGACTCAGTTCCTCATCTCTTACTAGATCTAAGTCTCTCCAACAAAGATTCAGGTGATGCCTCAAAGCCAGAACTCAACCTCCTCAATTGTTTCCATACAAATTTATCTGAAAACTCTTCAGAATCTAGTCATGGGAATGAAATGGATCCCCGGGTTTTCTCATGCAACTACTGCCAAAGAAAATTCTATAGTTCCCAAGCACTTGGAGGACACCAAAATGCACACAAACGTGAAAGAACTTTGGCGAGAAGAGGATACAAAACTGGTGCTTCAGTTTCAGTAGATTTTGGACAGAGGAACACCACTATGGCTTCTCTGTCTTCACATGGCTTATACAACAAATCACTTGGAATTCAGGTTCATTCAATGATCAATAAACCTTCTTATCAAACACCCTTTTTTGGGTTATGCCGTTCCCATGGCCAAAATGGGTGGCAGAGACAACCTTTGGATTCTCAACCAGCAATTGGGAACTTTCATGTGGGGCCAGAAACTGAATCATCCATGGCTGATACTGTTCCAAGGTTAAGCAAGTTTTCTACAAGGGTGGTGACAGAAGGATTTGGAGGTTACTGGTTGGGTAGCATTACTCATTTGAAGTCTAAACAAGAGAAGTTGCAGAAGCTTGACTTATCCCTCAAGCTCTAA 744 0.4167 MDLQRPEPCPKPSMDIQTERRQTEKEDQKHQHDSVPHLLLDLSLSNKDSGDASKPELNLLNCFHTNLSENSSESSHGNEMDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKTGASVSVDFGQRNTTMASLSSHGLYNKSLGIQVHSMINKPSYQTPFFGLCRSHGQNGWQRQPLDSQPAIGNFHVGPETESSMADTVPRLSKFSTRVVTEGFGGYWLGSITHLKSKQEKLQKLDLSLKL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0148 247 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 247 - -
Apr351g0148 247 MobiDBLite consensus disorder prediction 17 35 - -
Apr351g0148 247 MobiDBLite consensus disorder prediction 1 35 - -
Apr351g0148 247 Gene3D Classic Zinc Finger 64 136 - -
Apr351g0148 247 SUPERFAMILY beta-beta-alpha zinc fingers 82 112 IPR036236 -
Apr351g0148 247 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Apr351g0148 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Apr351g0148 247 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 247 IPR044246 GO:0009788
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0148 10 247 C2H2 Transcription Factor Family AT5G10970 39.608 7.63e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr351g0148 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0148 - - gmx:102666245 358.992