Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0143 ATGGCAAGACCCCAACAACGCTATCGAGGAGTTCGTCAAAGGCACTGGGGTTCTTGGGTCTCTGAAATTCGCCACCCTTTATTGAAGACAAGAATATGGCTTGGCACCTTTGAAACTGCAGAAGATGCAGCAAGAGCATATGATGAAGCAGCTAGGCTCATGTGTGGACCAAAAGCACGCACCAACTTTCCATACAACCAAAATGAACCACACTCATCTTCATCCAAGCTTCTCTCTGCCACTTTGACAGCAAAGTTACATAAGTGTCACATGGCTTCGCTTTCCCTTCAAATGGCTAAACAGAAACCAGCCCAAAAAGACCCTCAAGGTTCACAAAGATCCAATCCATTTCCCTCTGGCGGTGACATTGCTGGAACAAGCGCTGAGAGTGGTTTTAGATGGCCAGAGAACAGACACGAGGAATTGCAATGGCTAGAAGGGAATTGGGTTGGGCTTGAAGGCCAAGTTGAAGTTTCCCATCAACAATTTCAGCCAGTTCTTGAAGAAGATCACATAGAGCAGATGATACAAGAGTTGCTTGATTATGGATCAATTGAACTTTGTTCTGTTGGCTCAGCTTAG 582 0.4553 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFPYNQNEPHSSSSKLLSATLTAKLHKCHMASLSLQMAKQKPAQKDPQGSQRSNPFPSGGDIAGTSAESGFRWPENRHEELQWLEGNWVGLEGQVEVSHQQFQPVLEEDHIEQMIQELLDYGSIELCSVGSA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0143 193 Gene3D AP2/ERF domain 6 66 IPR036955 GO:0003700|GO:0006355
Apr351g0143 193 PANTHER ETHYLENE RESPONSE FACTOR 1 189 - -
Apr351g0143 193 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 MobiDBLite consensus disorder prediction 97 130 - -
Apr351g0143 193 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Apr351g0143 193 MobiDBLite consensus disorder prediction 98 121 - -
Apr351g0143 193 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Apr351g0143 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0143 1 190 AP2-EREBP Transcription Factor Family AT5G25190 64.737 8.80e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr351g0143 AP2 8.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0143 - - gmx:100777851 334.339