LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr351g0135	ATGAACGGCGAATTCTTCTTGCACGCGCCATTAACAACCACTTATTCGCTTGTTCATCACGCATCATCCCAATCGCACTTCCCATTTCAACAGCCTCACGACGCAAGAACTAGCGAAAGGACGCTCGAAGGAATCGCCGCGGTCGTCGGAGAACACGTTCTGTTCGGGCCAAAATCGACGCCGCGTTCTGGTTTCGTTTCAGAGCGTGGCGCGCCGAAGAAGAAAACAGAGAAAACCTGTGGCGCGTCGGCGAACAAGAGCTACAGAGGAGTGAGGAAGAGGCCGTGGGGAAGGTGGTCGGCGGAGATACGCGACCGCATCGGTCGGTGCCGCCACTGGCTTGGGACGTTCGACACTGCGGAGGAAGCGGCGCGTGCGTACGACGCGGCTGCAAGGCGCTTGAGAGGTTCGAAGGCTCGGACTAACTTCAATATACCCTCAGTGTTGCCGTTAACAACGTCTTCGGAAGCGAATGGGGTGAGTGGTGGTTCGGTGAAGCCGAAAACCGCACGCAACAGCGCTCGGAAGTGTTCCTCTGTGGAACAATTGTTCAGTGAGGTTCCCCAAGTTCGTAGAGAACGAGAGTGTGAAGTGAACGACAGTGTAGAGGTTGAGTTGAAGCTGGGTGTGAACTTCAGTGTTACAAGCACTAGAATGGTGATGTAG	666	0.5511	MNGEFFLHAPLTTTYSLVHHASSQSHFPFQQPHDARTSERTLEGIAAVVGEHVLFGPKSTPRSGFVSERGAPKKKTEKTCGASANKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGSKARTNFNIPSVLPLTTSSEANGVSGGSVKPKTARNSARKCSSVEQLFSEVPQVRRERECEVNDSVEVELKLGVNFSVTSTRMVM*	222

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr351g0135	221	MobiDBLite	consensus disorder prediction	60	86	-	-
	Apr351g0135	221	SMART	rav1_2	87	150	IPR001471	GO:0003700\|GO:0006355
	Apr351g0135	221	CDD	AP2	86	145	IPR001471	GO:0003700\|GO:0006355
	Apr351g0135	221	SUPERFAMILY	DNA-binding domain	87	145	IPR016177	GO:0003677
	Apr351g0135	221	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084	27	203	-	-
	Apr351g0135	221	PRINTS	Ethylene responsive element binding protein signature	88	99	IPR001471	GO:0003700\|GO:0006355
	Apr351g0135	221	PRINTS	Ethylene responsive element binding protein signature	110	126	IPR001471	GO:0003700\|GO:0006355
	Apr351g0135	221	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	27	203	-	-
	Apr351g0135	221	Gene3D	AP2/ERF domain	86	145	IPR036955	GO:0003700\|GO:0006355
	Apr351g0135	221	ProSiteProfiles	AP2/ERF domain profile.	87	144	IPR001471	GO:0003700\|GO:0006355
	Apr351g0135	221	Pfam	AP2 domain	87	136	IPR001471	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr351g0135	25	150	AP2-EREBP Transcription Factor Family	AT1G80580	59.690	3.93e-31	113

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Apr351g0135		AP2	1.6e-15	CL0081

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr351g0135	-		-	aprc:113857232	437.958