Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0133 ATGATCCAACGACTCACATTAAAGTTGCATGAAAAACGAGAAATGGATTATGAGGATAATTGTTTCTTCCATGAGAGTCACGGCGACGAGTTCCTCAGAGACATCCTACAGCAAACGCCTTCAGCTTTCTCTTCCGAAAGTGAAAGCGATCACTCATTTCACGCCGTTCAAAACAATTCCATCCCCAACGTCGCCGTTGCCGCTTCAGACGGCGCCGCTTTGAGTCAGACTCAGAGGCATGGGAACTTAATCAAAAGCAACAGCTCCAACTCCTCAGACGGTTCCAATTCCAAACGACCTCGTCGTTTCTCTTCTCCAAAGACGTACATTCTGTCGTTCGACAACTCAACTATGGTACCGGCCACACCCGAACCCTGCCTCAATTATGACCAATTATTGGGCGGCGATGGCGTGGGAAGCCTCAGGCCTTCTAAACGAGCCCACGAGAGTCAAAGCCCGGAACCCAAAGCAAGGCCCAATCAAGGAGCTAAGAGGGCCCGAAGCTCTTCTCAGACTTTCGATCACATAATGGCAGAGAGACGAAGAAGACAGGAACTCACAGAGAGGTTCATAGCACTCTCGGCCACCATTCCAGGCTTGAACAAGACGGACAAGGCTTCTGTACTTCGAGCAGCAATAGATTATGTGAAACAACTTCAAGAAAGGGTACAAGAACTAGAAAATCAAGACAAAAAGGGGGGTGTAGTAGAATCAGTGATATTGATGAAGAAACACGATCTGAATGGGAATGAAGACACCACCTCAAGTGATACCACCTCTGATAATTGTAGCATCCTTCCCGAGATGGAAGCAAGAGTGTTGGGAAATGAGGTTCTCATTGAGATCCACTGTGAGAAAGAAAATGGCATTGAACTCAAAATACTCGACCACCTTGAAAATCTTCATCTCATTGTCACCGGTAGCAGCGTCTTGCCATTTGGGAATTCCGCTCTTTGCATTACTATCATTGCTCAGATGGGTGACGAGTACAAAATGACAGTGGATGAACTAGTGAAAAACCTTAGAAAAGTGCTCTTGAAGTCACATGTGCTATGCGACAGTGATCCGTACTAG 1074 0.4655 MIQRLTLKLHEKREMDYEDNCFFHESHGDEFLRDILQQTPSAFSSESESDHSFHAVQNNSIPNVAVAASDGAALSQTQRHGNLIKSNSSNSSDGSNSKRPRRFSSPKTYILSFDNSTMVPATPEPCLNYDQLLGGDGVGSLRPSKRAHESQSPEPKARPNQGAKRARSSSQTFDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLQERVQELENQDKKGGVVESVILMKKHDLNGNEDTTSSDTTSDNCSILPEMEARVLGNEVLIEIHCEKENGIELKILDHLENLHLIVTGSSVLPFGNSALCITIIAQMGDEYKMTVDELVKNLRKVLLKSHVLCDSDPY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0133 357 MobiDBLite consensus disorder prediction 130 173 - -
Apr351g0133 357 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 351 - -
Apr351g0133 357 SMART finulus 176 225 IPR011598 GO:0046983
Apr351g0133 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
Apr351g0133 357 Gene3D - 168 235 IPR036638 GO:0046983
Apr351g0133 357 Coils Coil 209 229 - -
Apr351g0133 357 PANTHER BHLH TRANSCRIPTION FACTOR 9 351 - -
Apr351g0133 357 MobiDBLite consensus disorder prediction 80 105 - -
Apr351g0133 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 229 IPR036638 GO:0046983
Apr351g0133 357 Pfam Helix-loop-helix DNA-binding domain 175 220 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0133 161 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 48.438 1.14e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr351g0133 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0133 - - aprc:113857138 666.381