Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0119 ATGGCGACGGCAACATACCCTCCACCACCACCTTATTACAGACTTTACAAAGATTACTCTCAAGACCCTAAATCTGCTCCTGATCCTCCACCACCCATTGATGGCACTTACGTTTGTTTCGGAGGCAATTACACTACTAGCGATGTTCTACCGAGCTTAGAAGAACAAGGGGTGCGCCAGCTCTATTCTAAGGGGCCTAATGTTGATTTCAAGAAGGAGCTGAGGTCCCTTAATGGAGAGTTGCAACTGCACATTTTGGAGCTTGCTGATATTCTTATTGAGAGACCATCACAGTATGCGAGGAGAGTTGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCTCTGCGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACGTCAGATTCAGCAACGTAAACAAGCAGTGGAGGACATAAAGAGGAGGAGAGAAGAAGCACGAAGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGCCATTAG 507 0.4477 MATATYPPPPPYYRLYKDYSQDPKSAPDPPPPIDGTYVCFGGNYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILERQIQQRKQAVEDIKRRREEARRLLNESLATLDGH* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0119 168 Coils Coil 130 164 - -
Apr351g0119 168 MobiDBLite consensus disorder prediction 1 33 - -
Apr351g0119 168 Gene3D - 60 159 IPR044888 -
Apr351g0119 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Apr351g0119 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Apr351g0119 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Apr351g0119 Med7 3.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0119 K15148 - gmx:100792250 291.967