Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0117 ATGGCTTTTTGGTTTTGTTGCGGAAAGGCTTCGGATCGGTATGAACGAGGGAAAGAACAGCCTACATGGCGAGTGTTTTCTTTGAAGGAATTACATTCTGCTACAAATAATTTCAATTATGATAACAAGCTTGGAGAAGGGGGCTTTGGTAGTGTCTATTGGGGCCAACTTTGGGATGGATCACAAATTGCAGTGAAAAGACTGAAAGTTTGGAGCAACAAAGCAGAGATGGAATTTACCGTCGAAGTTGAAATATTGGCAAGAATACGACACAAGAATCTTCTCAGTCTACGTGGCTATTGTGCTGAAGGACAAGAACGGTTAATTGTGTATGAATATATGTCAAATATGAGTCTGCTCTCCCATCTTCATGGGCATCAATCGTCTGAATGCCTTCTTGATTGGAATAGGCGGATGAATATTGCAATTGGGTCTGCTGAGGGAATTGTATATCTTCACCACCAAGCAACACCACATATCATCCACAGAGATATTAAAGCAAGCAACGTGTTGCTGGATTCAGATTTCCAGGCCCGAGTTGCTGATTTTGGGTTTGCTAAGTTGATCCCTGATGGGGCAACACATGTGACTACAAAAGTTAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCTATGTTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGTATTCTCCTTTTAGAACTCGCAAGTGGTCACAGACCAATCAGAAAACTTAGTTCCACAATGAGAAGATCAATAGTTGATTGGGCATTGCCATTGGTTTGTGAGAAGAAATTTAGTGAACTTGCTGATCCGAGACTAAATGGTAACTATGTGGAGGAAGAGCTTAAAAGAGTTGTTTTTGTTGCACTTATATGTGCTCAGGATCTACCTGAAAAGAGACCCACCATGCTTGACGTGGTAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTCTCATATAGAGAACAGTGAAATGTTCAGAAACCCTCTAGCTGTAGAATGCAATGATGGGACATCAGCCACTGAAGAAAGTTTAGACTACATCTCAGAAGAAAAAGAATTAAAACATGAGTTGAAAGAGAAAACTGAGGTATAA 1095 0.4055 MAFWFCCGKASDRYERGKEQPTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKAEMEFTVEVEILARIRHKNLLSLRGYCAEGQERLIVYEYMSNMSLLSHLHGHQSSECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGHRPIRKLSSTMRRSIVDWALPLVCEKKFSELADPRLNGNYVEEELKRVVFVALICAQDLPEKRPTMLDVVELLKGESKDKFSHIENSEMFRNPLAVECNDGTSATEESLDYISEEKELKHELKEKTEV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0117 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 160 172 IPR008271 GO:0004672|GO:0006468
Apr351g0117 364 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Apr351g0117 364 SUPERFAMILY Protein kinase-like (PK-like) 19 309 IPR011009 -
Apr351g0117 364 PANTHER BNAA05G14800D PROTEIN 4 362 - -
Apr351g0117 364 Gene3D Phosphorylase Kinase; domain 1 9 113 - -
Apr351g0117 364 Pfam Protein kinase domain 39 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0117 364 SMART serkin_6 38 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0117 364 Gene3D Transferase(Phosphotransferase) domain 1 114 327 - -
Apr351g0117 364 ProSiteProfiles Protein kinase domain profile. 38 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr351g0117 364 PANTHER OS01G0750732 PROTEIN 4 362 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0117 25 305 Trihelix Transcription Factor Family AT1G68690 49.825 1.71e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Apr351g0117 Pkinase 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0117 - - gmx:100814204 634.024