Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0102 ATGGTGCAATCAAAGAAATTCAGAGGTGTAAGGCAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCACCCTTTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCAGAAGAAGCAGCAAGAGCATATGATGAAGCAGCCATTTTGATGAGTGGTAGAAATGCCAAAACAAACTTCCCAGTTGCTGATAACCCAATGGCAAATCAAAGTTCTACTTCTTCCTCCTCTTCCACAACATTATCTGCAGTTCTAAGTGCAAAGCTTAGGAAGTGCTGCAAGTCCCCTTCACCTTCTCTCACATGCCTAAGGCTTGACACTGAGAATTCTCACATTGGAGTGTGGCAGAAGCGAGCTGGCCCACGTTCTGATGCAAACTGGATCATGATGGTTGAGTTGGAAAGGAAGAAAAACCATGAGGGCAGTCCTTCTCATTCAGAAATACCTGTACTTGTTGATGCACCAGAGAAGGTAAAGCCTGAGGAAGACAGTGGCTTAGATGAGGAGCAGAGAATGGCTTTGCAGATGATAGAGGAACTTCTCAATAGGAATTGA 561 0.4545 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVADNPMANQSSTSSSSSTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDANWIMMVELERKKNHEGSPSHSEIPVLVDAPEKVKPEEDSGLDEEQRMALQMIEELLNRN* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0102 186 MobiDBLite consensus disorder prediction 154 171 - -
Apr351g0102 186 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Apr351g0102 186 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Apr351g0102 186 Coils Coil 179 186 - -
Apr351g0102 186 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Apr351g0102 186 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Apr351g0102 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 186 - -
Apr351g0102 186 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Apr351g0102 186 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 186 - -
Apr351g0102 186 MobiDBLite consensus disorder prediction 139 171 - -
Apr351g0102 186 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Apr351g0102 186 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Apr351g0102 186 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0102 1 186 AP2-EREBP Transcription Factor Family AT1G15360 62.814 1.64e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr351g0102 AP2 7.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0102 - - gmx:100796962 303.523