Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0069 ATGGTTGGAAGCACGTTGGCAGGGTTACAAGAACACCTCAAGTTGGCCAGAGACTATGCTCTCGAAGGACTTTATGATACCTCTATCATCTTCTTCGATGGTGCTCTTGCCCAGATCAACAAGCACCTCAACACTGTTGATGATCCTTTGATTCGTGCAAAATGGATGAACGTTAAGAAAGCTCTTTCTGAGGAAACAGAAGTTGTGAAGCAGCTAGATGCAGAGAGAAGGGCTTTTAAAGATAACCCTGTTGCAAGACGCCCTTCCTCACCTCCAATTTCTGCTAAATCTTCGTTTGTTTTTCAACCATTAGATGAGTATCCCACTTCATCGAGTGGTCCTGTTGATGATCCTGATGTATGGAGGCCACCTAGTAGGGATACTACCACTAGAAGACCTACAAGGTCTGGTCAAGTGGGTACTCGGAAGTCTCCACAAGAAGGAGCTTGGGCTCGAGGTTCTACCAGAACAGGTGCAACTGGACGTGGTGCAAAGGCTGGTGCTACAAGTAGGGTTAACTCAGGGGCCCGAGCATCAACTACTGGAAAGAAAGGTGCTGTTTCTGGAAAGTCTAGCAAGACAGATACAGCCAATGGTGATGCTGAAGATGGTAAGTCAAAGAAGGGACAATATGAAGGTCCTGATCCTGAGTTAGCTGCAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTGAGATGGGATGATGTTGCAGGGCTTACTGAAGCAAAAAGGCTTCTAGAAGAAGCTGTTGTTCTTCCCTTGTGGATGCCTGAATATTTCCAGGGAATCAGGAGACCCTGGAAAGGTGTCCTCATGTTTGGACCTCCAGGAACTGGGAAGACACTTCTTGCTAAAGCAGTTGCTACTGAGTGTGGGACCACTTTCTTTAATGTTTCTTCTGCCACTTTAGCTTCTAAATGGCGTGGAGAGAGTGAGCGAATGGTGCGGTGTTTGTTTGATCTTGCACGAGCATATGCACCAAGCACTATATTCATTGATGAAATTGATTCTCTATGCAATGCTAGGGGGGCATCTGGGGAGCATGAATCATCCCGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAGCAATAGTGCCACGAATGAAGATGGTAGCCGTAAAATAGTAATGGTTTTGGCAGCTACTAACTTCCCATGGGATATAGATGAAGCACTAAGGAGAAGGCTGGAAAAACGTATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGCTTATCCGTATAAATTTGAAAACTGTTGAGGTGGCTGCCGATGTCAACATAGATGAAGTGGCTCGCCGGACAGAGGGCTATAGTGGAGATGATTTGACAAATGTCTGTCGTGATGCTTCCTTGAATGGTATGAGGCGCAAGATAGCGGGAAAGACGCGTGATGAAATCAAGAACATGTCCAAGGACGAGATTTCAAATGATCCTGTTGCCATGTGTGATTTTGAAGAAGCTTTGGGAAAGGTCCAACGAAGTGTTTCTCAGGCTGACATTGAACGCCATGAGAAATGGTTTACTGAGTTTGGATCAGCATGA 1563 0.4536 MVGSTLAGLQEHLKLARDYALEGLYDTSIIFFDGALAQINKHLNTVDDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKDNPVARRPSSPPISAKSSFVFQPLDEYPTSSSGPVDDPDVWRPPSRDTTTRRPTRSGQVGTRKSPQEGAWARGSTRTGATGRGAKAGATSRVNSGARASTTGKKGAVSGKSSKTDTANGDAEDGKSKKGQYEGPDPELAAMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISNDPVAMCDFEEALGKVQRSVSQADIERHEKWFTEFGSA* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0069 520 MobiDBLite consensus disorder prediction 196 214 - -
Apr351g0069 520 CDD AAA 266 409 - -
Apr351g0069 520 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 506 IPR027417 -
Apr351g0069 520 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 520 IPR028596 GO:0008017|GO:0008568|GO:0051013
Apr351g0069 520 Pfam ATPase family associated with various cellular activities (AAA) 272 409 IPR003959 GO:0005524|GO:0016887
Apr351g0069 520 SMART AAA_5 268 411 IPR003593 -
Apr351g0069 520 MobiDBLite consensus disorder prediction 104 214 - -
Apr351g0069 520 Gene3D - 3 80 - -
Apr351g0069 520 Gene3D - 230 511 IPR027417 -
Apr351g0069 520 MobiDBLite consensus disorder prediction 130 153 - -
Apr351g0069 520 Pfam Vps4 C terminal oligomerisation domain 473 518 IPR015415 -
Apr351g0069 520 MobiDBLite consensus disorder prediction 80 99 - -
Apr351g0069 520 Pfam AAA+ lid domain 431 472 IPR041569 -
Apr351g0069 520 Coils Coil 62 82 - -
Apr351g0069 520 Gene3D - 410 496 - -
Apr351g0069 520 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 4 520 - -
Apr351g0069 520 PANTHER AAA DOMAIN-CONTAINING 4 520 - -
Apr351g0069 520 ProSitePatterns AAA-protein family signature. 381 400 IPR003960 GO:0005524|GO:0016887
Apr351g0069 520 MobiDBLite consensus disorder prediction 172 195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0069 224 512 Calmodulin-binding Proteins AT3G56690 39.933 5.17e-51 186