Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr351g0056 ATGAGGAACTTAGCATTGGACTTCATTCTCCTGTGGGACTCCGAGGAAGCCCGGCAAAAGATAATCTTCACCGGCGACCGGCAACAGGCAAGGTGGTACCTCCAAGCCGTCGACGTAATTCAGCGCTCCGATGATCAAAGCACCATCCCCATCGCCATGGCACGCTTGGAAAACGAATTCCGTAACATACTAATCTCATACACCAACCCCACTTCTTCTCTTGACCCTCTAAACACCGAAGAAGAAGAAAAAGAAGCCCAAAACAGTTTTGGTTGCTTCCGTCATTTCCGCTTCAACGGTTCAGCAAAACAACATGATGCTGCTGCTGCTGCTGATGATGATAAGCTTCCTCACATTGGCGTGATACCTTACGATGCTATAAAGGACCTGCGTTGCATCGCGGAAAGGATGATATCATCTGGGTACTTGGGCAACTGCATCCATGTTTATTCCAGAGTTAGAAAATCTGTTTTTGTTGCCACTGTCCAGAGGCTGGTCATCAGTGATGTTAAGCTTCGGCTTAAGGCCAAGATCCAGCGTTGGAGAGAGGCTTCTACGGTTTATGTTAGGACCTTGTTTGCCAACGAGAAGGAGCTCTGTGAGAAAATCTTTGATGAGGTTGGTCCTGAAATTGATCGTGCCTGTTTCATGGAAACTGTGAAAGAACCTGCCATTCAACTTCTTAAATATGCTGACGCTACTTGCATGAGCCCCATCTCGTCACCTGACATCTTGTTCAAGATTCTAGTGCTGTATGAAGCTTTGGCTGATTTTGATCGTGTCTTTGACTTCAAATCCTCTGAGTCTATACGTGTTATGGTTGCTGAGGTTCTGCCTCGGTTGGCTGAAGCTGGAAGAAGGGCTTTGTATTTGTTTGAATGTTCTGTGGTTTGGGACAAATTTACGGTTGTTATCCCCAGCGGAGCAATTCACCCCTTCACCACTTATGTCATGAATTATTTAAATTTTTTCTCTGATTACAAACAAACTTTGAATAAATTTATAGTACCTAAGCCATCAATGGAGTCATTTTTTGCTGACATCAAAGAGGAAGGGGAAACCCCGTTGCGTGTTCACATAATTTGGATTTTTGAGGAATTGCAAGTTAAGCTGCAGGGTAAGTCCAAGCAATATAAAGACGAGTCTTTGTCTCATCTGTTCATAATGAACAATGTCCACTACACTCATAAGAGAGTGAGAAGAAATTCTAAATTGAGGGACATAATTGGAGATGGTCGTTTGAAGGAGCTGGAGAGGAAATTGACGCAGGCTGCTATTAGCCACGAGAAAGCAACCTGGGGGAGGGTGTTGGATTGTTTGACAGACGAGGGATTGTATTTGGAAAAGGGTGACAAGATATCAATCTCAAAGAGTGCTTTGAGAAAAAAAAATTAA 1395 0.438 MRNLALDFILLWDSEEARQKIIFTGDRQQARWYLQAVDVIQRSDDQSTIPIAMARLENEFRNILISYTNPTSSLDPLNTEEEEKEAQNSFGCFRHFRFNGSAKQHDAAAAADDDKLPHIGVIPYDAIKDLRCIAERMISSGYLGNCIHVYSRVRKSVFVATVQRLVISDVKLRLKAKIQRWREASTVYVRTLFANEKELCEKIFDEVGPEIDRACFMETVKEPAIQLLKYADATCMSPISSPDILFKILVLYEALADFDRVFDFKSSESIRVMVAEVLPRLAEAGRRALYLFECSVVWDKFTVVIPSGAIHPFTTYVMNYLNFFSDYKQTLNKFIVPKPSMESFFADIKEEGETPLRVHIIWIFEELQVKLQGKSKQYKDESLSHLFIMNNVHYTHKRVRRNSKLRDIIGDGRLKELERKLTQAAISHEKATWGRVLDCLTDEGLYLEKGDKISISKSALRKKN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr351g0056 464 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 8 463 - -
Apr351g0056 464 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 463 IPR004140 GO:0000145|GO:0006887
Apr351g0056 464 Gene3D Exocyst complex component Exo70 9 464 - -
Apr351g0056 464 SUPERFAMILY Cullin repeat-like 14 461 IPR016159 -
Apr351g0056 464 Pfam Exo70 exocyst complex subunit 179 460 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr351g0056 9 463 EXO70 exocyst subunit family AT1G72470 39.662 9.96e-105 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr351g0056 K07195 - aprc:113857215 907.901